Nested Sampling for General Bayesian Computation

被引:1161
作者
Skilling, John [1 ]
机构
[1] Maximum Entropy Data Consultants Ltd, Kenmare, County Kerry, Ireland
来源
BAYESIAN ANALYSIS | 2006年 / 1卷 / 04期
关键词
Bayesian computation; evidence; marginal likelihood; algorithm; nest; annealing; phase change; model selection;
D O I
10.1214/06-BA127
中图分类号
O1 [数学];
学科分类号
0701 ; 070101 ;
摘要
Nested sampling estimates directly how the likelihood function relates to prior mass. The evidence (alternatively the marginal likelihood, marginal density of the data, or the prior predictive) is immediately obtained by summation. It is the prime result of the computation, and is accompanied by an estimate of numerical uncertainty. Samples from the posterior distribution are an optional by-product, obtainable for any temperature. The method relies on sampling within a hard constraint on likelihood value, as opposed to the softened likelihood of annealing methods. Progress depends only on the shape of the "nested" contours of likelihood, and not on the likelihood values. This invariance (over monotonic re-labelling) allows the method to deal with a class of phase-change problems which effectively defeat thermal annealing.
引用
收藏
页码:833 / 859
页数:27
相关论文
共 14 条
[1]  
[Anonymous], 2003, ADV NEURAL INFORM PR
[2]   MULTICANONICAL ALGORITHMS FOR 1ST ORDER PHASE-TRANSITIONS [J].
BERG, BA ;
NEUHAUS, T .
PHYSICS LETTERS B, 1991, 267 (02) :249-253
[3]   HYBRID MONTE-CARLO [J].
DUANE, S ;
KENNEDY, AD ;
PENDLETON, BJ ;
ROWETH, D .
PHYSICS LETTERS B, 1987, 195 (02) :216-222
[4]  
Gelman A, 1998, STAT SCI, V13, P163
[5]  
HASTINGS WK, 1970, BIOMETRIKA, V57, P97, DOI 10.1093/biomet/57.1.97
[6]  
MACKAY DJC, 2003, INFORM THEORY INFERE, P379
[7]   MACHINE CALCULATION OF THERMODYNAMIC PROPERTIES OF A SIMPLE FLUID AT SUPERCRITICAL TEMPERATURES [J].
MCDONALD, IR ;
SINGER, K .
JOURNAL OF CHEMICAL PHYSICS, 1967, 47 (11) :4766-&
[8]   EQUATION OF STATE CALCULATIONS BY FAST COMPUTING MACHINES [J].
METROPOLIS, N ;
ROSENBLUTH, AW ;
ROSENBLUTH, MN ;
TELLER, AH ;
TELLER, E .
JOURNAL OF CHEMICAL PHYSICS, 1953, 21 (06) :1087-1092
[9]  
Neal RM, 2003, ANN STAT, V31, P705, DOI 10.1214/aos/1056562461
[10]   AN IMPROVED ACCEPTANCE PROCEDURE FOR THE HYBRID MONTE-CARLO ALGORITHM [J].
NEAL, RM .
JOURNAL OF COMPUTATIONAL PHYSICS, 1994, 111 (01) :194-203