Comprehensive Analysis of the Expression and Clinical Significance of a Ferroptosis-Related Genome in Ovarian Serous Cystadenocarcinoma: A Study Based on TCGA Data

被引:9
作者
Yang, Hua [1 ]
机构
[1] Sun Yat Sen Univ, Affiliated Hosp 5, Dept Gynecol, Zhuhai 519000, Peoples R China
关键词
Ferroptosis; TCGA; bioinformatics; prognosis; ovarian serous cystadenocarcinoma; NECK-CANCER CELLS; IRON-METABOLISM; RESISTANT HEAD; DEATH; CHEMOTHERAPY; INHIBITION; PATHWAY; BREAST; XCT;
D O I
10.32604/oncologie.2022.026447
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Epithelial ovarian cancer (EOC) is the deadliest malignancy among the gynecologic tumors, and ovar-ian serous cystadenocarcinoma (OV) is the dominant histological type. Ferroptosis is a novel iron-dependent, pro-grammed form of cell death, and agents that trigger ferroptosis may constitute potential anti-cancer therapies. Materials and Methods: We herein extracted the genes that participate in the process of ferroptosis from the online FerrDb database to create a ferroptosis-related genome (FRG), and then comprehensively analyzed the relationship between the mRNA expression of each gene and the clinicopathologic features of The Cancer Genome Atlas (TCGA)-OV cohort. Results: We found that most of the FRG genes were differently expressed between OV and normal ovarian tissue and were significantly related to the prognosis of OV. In addition, gene ontology (GO) ana -lysis revealed that the candidate genes of the FRG were primarily associated with responses to nutrient levels, oxi-dative stress, oxygen levels, and neuronal death. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis indicated that candidate genes of the FRG were primarily associated with ferroptosis, hepatitis B, mitophagy, pros-tate cancer, and bladder cancer. The protein-protein interaction (PPI) network exhibited 132 nodes, 565 edges, an average node degree of 9.94, and an average local clustering coefficient of 0.539, indicating that the proteins were closely interrelated with one another and constitute a biological cluster. A comprehensive analysis of the top 5 genes involved in promoting and preventing ferroptosis revealed that these genes were differently expressed between OV and normal ovarian tissue, were significantly related to the prognosis of OV, reflected excellent diagnostic value, and were significantly correlated with immune cell infiltration in the tumor microenvironment (TME), polarization of macrophages, and with immune checkpoints. The protein levels of top 5 genes involved in promoting ferroptosis were differentially expressed between OV and normal ovarian tissue, and the top 5 genes involved in preventing ferroptosis were constitutively expressed in most of the normal tissues and tumors. Conclusions: We herein ascer-tained that the majority of the FRG was differentially expressed between OV and normal ovarian tissue, that the genes were significantly related to prognosis, and that the dysregulation of ferroptosis appeared to influence the development and progression of OV. The FRG showed an excellent diagnostic value for OV, and we postulate that it is significantly correlated with immune cell infiltration and immune checkpoints in the TME. We posit that targeting ferroptosis might comprise a novel anti-cancer therapy in OV.
引用
收藏
页码:835 / 863
页数:29
相关论文
共 87 条
[31]   Baicalin induces ferroptosis in bladder cancer cells by downregulating FTH1 [J].
Kong, Na ;
Chen, Xiaying ;
Feng, Jiao ;
Duan, Ting ;
Liu, Shuiping ;
Sun, Xueni ;
Chen, Peng ;
Pan, Ting ;
Yan, Lili ;
Jin, Ting ;
Xiang, Yu ;
Gao, Quan ;
Wen, Chengyong ;
Ma, Weirui ;
Liu, Wencheng ;
Zhang, Mingming ;
Yang, Zuyi ;
Wang, Wengang ;
Zhang, Ruonan ;
Chen, Bi ;
Xie, Tian ;
Sui, Xinbing ;
Tao, Wei .
ACTA PHARMACEUTICA SINICA B, 2021, 11 (12) :4045-4054
[32]   Homologous Recombination Deficiency: Exploiting the Fundamental Vulnerability of Ovarian Cancer [J].
Konstantinopoulos, Panagiotis A. ;
Ceccaldi, Raphael ;
Shapiro, Geoffrey I. ;
D'Andrea, Alan D. .
CANCER DISCOVERY, 2015, 5 (11) :1137-1154
[33]   Cystine transporter SLC7A11/xCT in cancer: ferroptosis, nutrient dependency, and cancer therapy [J].
Koppula, Pranavi ;
Zhuang, Li ;
Gan, Boyi .
PROTEIN & CELL, 2021, 12 (08) :599-620
[34]   Prognostic value of tumor-infiltrating B lymphocytes and plasma cells in triple-negative breast cancer [J].
Kuroda, Hajime ;
Jamiyan, Tsengelmaa ;
Yamaguchi, Rin ;
Kakumoto, Akinari ;
Abe, Akihito ;
Harada, Oi ;
Enkhbat, Bayarmaa ;
Masunaga, Atsuko .
BREAST CANCER, 2021, 28 (04) :904-914
[35]   Role of acyl-CoA synthetase ACSL4 in arachidonic acid metabolism [J].
Kuwata, Hiroshi ;
Hara, Shuntaro .
PROSTAGLANDINS & OTHER LIPID MEDIATORS, 2019, 144
[36]   Web-Based Survival Analysis Tool Tailored for Medical Research (KMplot): Development and Implementation [J].
Lanczky, Andras ;
Gyorffy, Balazs .
JOURNAL OF MEDICAL INTERNET RESEARCH, 2021, 23 (07)
[37]   TPL Inhibits the Invasion and Migration of Drug-Resistant Ovarian Cancer by Targeting the PI3K/AKT/NF-κB-Signaling Pathway to Inhibit the Polarization of M2 TAMs [J].
Le, Fuyin ;
Yang, Lilan ;
Han, Yiwen ;
Zhong, Yanying ;
Zhan, Fuliang ;
Feng, Ying ;
Hu, Hui ;
Chen, Tingtao ;
Tan, Buzhen .
FRONTIERS IN ONCOLOGY, 2021, 11
[38]   Inhibition of Glutaredoxin 5 predisposes Cisplatin-resistant Head and Neck Cancer Cells to Ferroptosis [J].
Lee, Jaewang ;
You, Ji Hyeon ;
Shin, Daiha ;
Roh, Jong-Lyel .
THERANOSTICS, 2020, 10 (17) :7775-7786
[39]   GEPIA2021: integrating multiple deconvolution-based analysis into GEPIA [J].
Li, Chenwei ;
Tang, Zefang ;
Zhang, Wenjie ;
Ye, Zhaochen ;
Liu, Fenglin .
NUCLEIC ACIDS RESEARCH, 2021, 49 (W1) :W242-W246
[40]   TIMER: A Web Server for Comprehensive Analysis of Tumor-Infiltrating Immune Cells [J].
Li, Taiwen ;
Fan, Jingyu ;
Wang, Binbin ;
Traugh, Nicole ;
Chen, Qianming ;
Liu, Jun S. ;
Li, Bo ;
Liu, X. Shirley .
CANCER RESEARCH, 2017, 77 (21) :E108-E110