What can we predict about viral evolution and emergence?

被引:43
作者
Holmes, Edward C. [1 ,2 ,3 ]
机构
[1] Univ Sydney, Sch Biol Sci, Sydney Emerging Infect & Biosecur Inst, Sydney, NSW 2006, Australia
[2] Univ Sydney, Sydney Med Sch, Sydney, NSW 2006, Australia
[3] NIH, Fogarty Int Ctr, Bethesda, MD 20892 USA
基金
澳大利亚国家健康与医学研究理事会;
关键词
METAGENOMIC ANALYSIS; RABIES VIRUS; BAT; TRANSMISSION; BIODIVERSITY; RESERVOIRS; ORIGIN; ESTABLISHMENT; CORONAVIRUS; ADAPTATION;
D O I
10.1016/j.coviro.2012.12.003
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Predicting the emergence of infectious diseases has been touted as one of the most important goals of biomedical science, with an array of funding schemes and research projects. However, evolutionary biology generally has a dim view of prediction, and there is a danger that erroneous predictions will mean a misuse of resources and undermine public confidence. Herein, I outline what can be realistically predicted about viral evolution and emergence, argue that any success in predicting what may emerge is likely to be limited, but that forecasting how viruses might evolve and spread following emergence is more tractable. I also emphasize that a properly grounded research program in disease prediction must involve a synthesis of ecological and genetic perspectives.
引用
收藏
页码:180 / 184
页数:5
相关论文
共 56 条
[31]   On HIV diversity [J].
Ndung'u, Thumbi ;
Weiss, Robin A. .
AIDS, 2012, 26 (10) :1255-1260
[32]   Cross-species virus transmission and the emergence of new epidemic diseases [J].
Parrish, Colin R. ;
Holmes, Edward C. ;
Morens, David M. ;
Park, Eun-Chung ;
Burke, Donald S. ;
Calisher, Charles H. ;
Laughlin, Catherine A. ;
Saif, Linda J. ;
Daszak, Peter .
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2008, 72 (03) :457-+
[33]   Identifying genetic markers of adaptation for surveillance of viral host jumps [J].
Pepin, Kim M. ;
Lass, Sandra ;
Pulliam, Juliet R. C. ;
Read, Andrew F. ;
Lloyd-Smith, James O. .
NATURE REVIEWS MICROBIOLOGY, 2010, 8 (11) :802-813
[34]   The Fecal Viral Flora of Wild Rodents [J].
Phan, Tung G. ;
Kapusinszky, Beatrix ;
Wang, Chunlin ;
Rose, Robert K. ;
Lipton, Howard L. ;
Delwart, Eric L. .
PLOS PATHOGENS, 2011, 7 (09)
[35]   The Origin and Prevention of Pandemics [J].
Pike, Brian L. ;
Saylors, Karen E. ;
Fair, Joseph N. ;
LeBreton, Matthew ;
Tamoufe, Ubald ;
Djoko, Cyrille F. ;
Rimoin, Anne W. ;
Wolfe, Nathan D. .
CLINICAL INFECTIOUS DISEASES, 2010, 50 (12) :1636-1640
[36]   A perspective on lyssavirus emergence and perpetuation [J].
Rupprecht, Charles E. ;
Turmelle, Amy ;
Kuzmin, Ivan V. .
CURRENT OPINION IN VIROLOGY, 2011, 1 (06) :662-670
[37]   The Potential for Respiratory Droplet-Transmissible A/H5N1 Influenza Virus to Evolve in a Mammalian Host [J].
Russell, Colin A. ;
Fonville, Judith M. ;
Brown, Andre E. X. ;
Burke, David F. ;
Smith, David L. ;
James, Sarah L. ;
Herfst, Sander ;
van Boheemen, Sander ;
Linster, Martin ;
Schrauwen, Eefje J. ;
Katzelnick, Leah ;
Mosterin, Ana ;
Kuiken, Thijs ;
Maher, Eileen ;
Neumann, Gabriele ;
Osterhaus, Albert D. M. E. ;
Kawaoka, Yoshihiro ;
Fouchier, Ron A. M. ;
Smith, Derek J. .
SCIENCE, 2012, 336 (6088) :1541-1547
[38]   Widespread Infection with Homologues of Human Parvoviruses B19, PARV4, and Human Bocavirus of Chimpanzees and Gorillas in the Wild [J].
Sharp, Colin P. ;
LeBreton, Matthew ;
Kantola, Kalle ;
Nana, Ahmadou ;
Diffo, Joseph Le Doux ;
Djoko, Cyrille F. ;
Tamoufe, Ubald ;
Kiyang, John A. ;
Babila, Tafon G. ;
Ngole, Eitel Mpoudi ;
Pybus, Oliver G. ;
Delwart, Eric ;
Delaporte, Eric ;
Peeters, Martine ;
Soderlund-Venermo, Maria ;
Hedman, Klaus ;
Wolfe, Nathan D. ;
Simmonds, Peter .
JOURNAL OF VIROLOGY, 2010, 84 (19) :10289-10296
[39]   The evolution of HIV-1 and the origin of AIDS [J].
Sharp, Paul M. ;
Hahn, Beatrice H. .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2010, 365 (1552) :2487-2494
[40]   Why do RNA viruses recombine? [J].
Simon-Loriere, Etienne ;
Holmes, Edward C. .
NATURE REVIEWS MICROBIOLOGY, 2011, 9 (08) :617-626