Folding funnels and binding mechanisms

被引:485
|
作者
Ma, BY
Kumar, S
Tsai, CJ
Nussinov, R [1 ]
机构
[1] NCI, Intramural Res Support Program, SAIC, Lab Expt & Computat Biol,FCRDC, Ft Detrick, MD 21702 USA
[2] Tel Aviv Univ, Sackler Fac Med, Sackler Inst Mol Med, IL-69978 Tel Aviv, Israel
来源
PROTEIN ENGINEERING | 1999年 / 12卷 / 09期
关键词
binding; conformational ensembles; energy landscape; folding; funnels; lock-and-key vs induced fit; misfolding;
D O I
10.1093/protein/12.9.713
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The long-held views on lock-and-key versus induced fit in binding arose from the notion that a protein exists in a single, most stable conformation, dictated by its sequence. However, in solution proteins exist in a range of conformations, which may be described by statistical mechanical laws and their populations follow statistical distributions. Upon binding, the equilibrium will shift in favor of the bound conformation from the ensemble of conformations around the bottom of the folding funnel. Hence here we extend the implications and the usefulness of the folding funnel concept to explain fundamental binding mechanisms.
引用
收藏
页码:713 / 720
页数:8
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