Large-Scale Network Connectivity of Synechococcus elongatus PCC7942 Metabolism

被引:0
|
作者
Triana-Dopico, Julian [1 ]
Founes-Merchan, Johanna [1 ]
Garces-Villon, Laura [1 ]
Mendieta-Villalba, Nadia [1 ]
Rojas-Parraga, Tania [1 ]
Teran-Alvarado, Fabiola [1 ]
机构
[1] Univ Politecn Salesiana, Guayaquil, Ecuador
来源
2016 IEEE ECUADOR TECHNICAL CHAPTERS MEETING (ETCM) | 2016年
关键词
Connectivity analysis; hub metabolites; metabolic network topology; Synechococcus elongatus PCC7942; MECHANISTIC EXPLANATION; CARBON-DIOXIDE; RECONSTRUCTION; BIOLOGY; MODEL;
D O I
暂无
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
From the topological perspective, the availability of genome-scale metabolic network models assists to the large-scale analysis of the metabolites connections, and thus, the evaluation of the cell metabolic capabilities to produce high added-value molecules. In this study, a comprehensive connectivity analysis of the published genome-scale metabolic model of Synechococcus elongatus PCC7942 (iSyf715) is presented, highlighting the most connected metabolites of this biological system. To get a suitable fit, the connectivity distribution of the metabolic model is evaluated using the cumulative distribution function (Pareto's law), verifying a power-law distribution in iSyf715 metabolic network (gamma=2.203). Additionally, through the comparison of the connectivity distributions in different microbial metabolic network models, the scale-free behavior of these metabolic networks is verified. The prediction of the metabolic network connectivity could supports the determination of the underlying functioning principles of certain cellular processes.
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收藏
页数:6
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