Characterization, crystallization and preliminary X-ray diffraction analysis of an (S)-specific esterase (pfEstA) from Pseudomonas fluorescens KCTC 1767: enantioselectivity for potential industrial applications

被引:3
作者
Kim, Seulgi [2 ]
Tri Duc Ngo [1 ]
Kim, Kyeong Kyu [1 ]
Kim, T. Doohun [2 ]
机构
[1] Sungkyunkwan Univ, Sch Med, Samsung Biomed Res Inst, Dept Mol Cell Biol, Suwon 440746, South Korea
[2] Ajou Univ, Grad Sch Interdisciplinary Programs, Dept Mol Sci & Technol, Suwon 443749, South Korea
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2012年 / 68卷
基金
新加坡国家研究基金会;
关键词
CANDIDA-RUGOSA LIPASE; AMPC BETA-LACTAMASE; KETOPROFEN; RESOLUTION; IMMOBILIZATION; IDENTIFICATION; MECHANISM; ENZYMES; ESTB;
D O I
10.1107/S1744309112040626
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The structures and reaction mechanisms of enantioselective hydrolases, which can be used in industrial applications such as biotransformations, are largely unknown. Here, the X-ray crystallographic study of a novel (S)-specific esterase (pfEstA) from Pseudomonas fluorescens KCTC 1767, which can be used in the production of (S)-ketoprofen, is described. Multiple sequence alignments with other hydrolases revealed that pfEstA contains a conserved Ser67 within the S-X-X-K motif as well as a highly conserved Tyr156. Recombinant protein containing an N-terminal His tag was expressed in Escherichia coli, purified to homogeneity and characterized using SDS-PAGE, MALDI-TOF MS and enantioselective analysis. pfEstA was crystallized using a solution consisting of 1 M sodium citrate, 0.1 M CHES pH 9.5, and X-ray diffraction data were collected to a resolution of 1.9 A with an R-merge of 7.9%. The crystals of pfEstA belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 65.31, b = 82.13, c = 100.41 angstrom, alpha = beta = gamma = 90 degrees
引用
收藏
页码:1374 / 1377
页数:4
相关论文
共 39 条
[1]   PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution [J].
Adams, Paul D. ;
Afonine, Pavel V. ;
Bunkoczi, Gabor ;
Chen, Vincent B. ;
Davis, Ian W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Hung, Li-Wei ;
Kapral, Gary J. ;
Grosse-Kunstleve, Ralf W. ;
McCoy, Airlie J. ;
Moriarty, Nigel W. ;
Oeffner, Robert ;
Read, Randy J. ;
Richardson, David C. ;
Richardson, Jane S. ;
Terwilliger, Thomas C. ;
Zwart, Peter H. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :213-221
[2]   Overview of screening for new microbial catalysts and their uses in organic synthesis - selection and optimization of biocatalysts [J].
Asano, Y .
JOURNAL OF BIOTECHNOLOGY, 2002, 94 (01) :65-72
[3]  
BRADFORD MM, 1976, ANAL BIOCHEM, V72, P248, DOI 10.1016/0003-2697(76)90527-3
[4]   AN AUTOMATED-SYSTEM FOR MICROBATCH PROTEIN CRYSTALLIZATION AND SCREENING [J].
CHAYEN, NE ;
STEWART, PDS ;
MAEDER, DL ;
BLOW, DM .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1990, 23 :297-302
[5]   Theoretical Study of the Mechanism of Proton Transfer in the Esterase Estb from Burkholderia Gladioli [J].
Chen, Liang ;
Kong, Xiangqian ;
Liang, Zhongjie ;
Ye, Fei ;
Yu, Kunqian ;
Dai, Weiyi ;
Wu, Daocheng ;
Luo, Cheng ;
Jiang, Hualiang .
JOURNAL OF PHYSICAL CHEMISTRY B, 2011, 115 (44) :13019-13025
[6]   The deacylation mechanism of AmpC β-lactamase at ultrahigh resolution [J].
Chen, Y ;
Minasov, G ;
Roth, TA ;
Prati, F ;
Shoichet, BK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (09) :2970-2976
[7]   Construction and characterization of a recombinant esterase with high activity and enantio selectivity to (S)-ketoprofen ethyl ester [J].
Choi, GS ;
Kim, JY ;
Kim, JH ;
Ryu, YW ;
Kim, GJ .
PROTEIN EXPRESSION AND PURIFICATION, 2003, 29 (01) :85-93
[8]   Extremely thermostable esterases from the thermoacidophilic euryarchaeon Picrophilus torridus [J].
Hess, Matthias ;
Katzer, Moritz ;
Antranikian, Garabed .
EXTREMOPHILES, 2008, 12 (03) :351-364
[9]   Characterization of a novel oligomeric SGNH-arylesterase from Sinorhizobium meliloti 1021 [J].
Hwang, Heejin ;
Kim, SeungBum ;
Yoon, Sangyoung ;
Ryu, Yeonwoo ;
Lee, Sang Yoon ;
Kim, T. Doohun .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2010, 46 (02) :145-152
[10]   Inverting enantio selectivity of Burkholderia gladioli esterase EstB by directed and designed evolution [J].
Ivancic, Mirela ;
Valinger, Goran ;
Gruber, Karl ;
Schwab, Helmut .
JOURNAL OF BIOTECHNOLOGY, 2007, 129 (01) :109-122