On the Interplay between the Evolvability and Network Robustness in an Evolutionary Biological Network: A Systems Biology Approach

被引:11
作者
Chen, Bor-Sen [1 ]
Lin, Ying-Po [1 ]
机构
[1] Natl Tsing Hua Univ, Dept Elect Engn, Lab Control & Syst Biol, Hsinchu 30013, Taiwan
来源
EVOLUTIONARY BIOINFORMATICS | 2011年 / 7卷
关键词
robustness; evolvability; natural selection; gene network; biochemical network; evolutionary adaptability; network robustness; stability; sensitivity; bias/variance dilemma; stochastic system; antagonistic pleiotropy of gene network; TRANSCRIPTIONAL REGULATORY NETWORKS; NONLINEAR STOCHASTIC-SYSTEMS; GENE NETWORKS; BIOCHEMICAL NETWORKS; SYNTHETIC BIOLOGY; MOLECULAR NOISES; CIRCUIT-DESIGN; YEAST; EXPRESSION; PRINCIPLES;
D O I
10.4137/EBO.S8123
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
In the evolutionary process, the random transmission and mutation of genes provide biological diversities for natural selection. In order to preserve functional phenotypes between generations, gene networks need to evolve robustly under the influence of random perturbations. Therefore, the robustness of the phenotype, in the evolutionary process, exerts a selection force on gene networks to keep network functions. However, gene networks need to adjust, by variations in genetic content, to generate phenotypes for new challenges in the network's evolution, ie, the evolvability. Hence, there should be some interplay between the evolvability and network robustness in evolutionary gene networks. In this study, the interplay between the evolvability and network robustness of a gene network and a biochemical network is discussed from a nonlinear stochastic system point of view. It was found that if the genetic robustness plus environmental robustness is less than the network robustness, the phenotype of the biological network is robust in evolution. The tradeoff between the genetic robustness and environmental robustness in evolution is discussed from the stochastic stability robustness and sensitivity of the nonlinear stochastic biological network, which may be relevant to the statistical tradeoff between bias and variance, the so-called bias/variance dilemma. Further, the tradeoff could be considered as an antagonistic pleiotropic action of a gene network and discussed from the systems biology perspective.
引用
收藏
页码:201 / 233
页数:33
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