Swiss army knives: non-canonical functions of nuclear Drosha and Dicer

被引:75
作者
Burger, Kaspar [1 ]
Gullerova, Monika [1 ]
机构
[1] Sir William Dunn Sch Pathol, Oxford OX1 3RE, England
基金
英国医学研究理事会;
关键词
RNA-POLYMERASE-II; SMALL INTERFERING RNAS; DOUBLE-STRANDED-RNA; CASPASE-DEPENDENT CONVERSION; DIRECTED DNA METHYLATION; FISSION YEAST DICER; R-LOOP FORMATION; TRANSCRIPTIONAL TERMINATION; CAENORHABDITIS-ELEGANS; REGULATORY RNAS;
D O I
10.1038/nrm3994
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The RNase III enzymes Drosha and Dicer are essential for the production of small non-coding RNAs (ncRNAs). In canonical RNAi, microRNAs (mi-RNAs) regulate gene expression by post-transcriptional gene silencing. In non-canonical RNAi, nuclear RNAi factors generate small ncRNAs that are essential for transcriptional gene silencing. Recent evidence points to the existence of additional non-canonical nuclear RNAi functions in various organisms, including in genome maintenance and editing, as well as in DNA repair. Drosha and Dicer directly regulate gene expression and RNA metabolism at different stages, such as transcriptional initiation and termination, and the processing of various RNA species, including pre-mRNAs. Furthermore, Dicer isoforms were recently discovered and attributed with roles in apoptosis, development and disease.
引用
收藏
页码:417 / 430
页数:14
相关论文
共 137 条
[1]   Beyond Secondary Structure: Primary-Sequence Determinants License Pri-miRNA Hairpins for Processing [J].
Auyeung, Vincent C. ;
Ulitsky, Igor ;
McGeary, Sean E. ;
Bartel, David P. .
CELL, 2013, 152 (04) :844-858
[2]   An extended dsRBD with a novel zinc-binding motif mediates nuclear retention of fission yeast Dicer [J].
Barraud, Pierre ;
Emmerth, Stephan ;
Shimada, Yukiko ;
Hotz, Hans-Rudolf ;
Allain, Frederic H-T ;
Buehler, Marc .
EMBO JOURNAL, 2011, 30 (20) :4223-4235
[3]   RNA silencing in plants [J].
Baulcombe, D .
NATURE, 2004, 431 (7006) :356-363
[4]   Candida albicans Dicer (CaDcr1) is required for efficient ribosomal and spliceosomal RNA maturation [J].
Bernstein, Douglas A. ;
Vyas, Valmik K. ;
Weinberg, David E. ;
Drinnenberg, Ines A. ;
Bartel, David P. ;
Fink, Gerald R. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (02) :523-528
[5]   RNA-directed DNA methylation requires stepwise binding of silencing factors to long non-coding RNA [J].
Boehmdorfer, Gudrun ;
Rowley, M. Jordan ;
Kucinski, Jan ;
Zhu, Yongyou ;
Amies, Ivan ;
Wierzbicki, Andrzej T. .
PLANT JOURNAL, 2014, 79 (02) :181-191
[6]   Co-transcriptional RNA cleavage provides a failsafe termination mechanism for yeast RNA polymerase I [J].
Braglia, Priscilla ;
Kawauchi, Junya ;
Proudfoot, Nick J. .
NUCLEIC ACIDS RESEARCH, 2011, 39 (04) :1439-1448
[7]   Human box C/D snoRNAs with miRNA like functions: expanding the range of regulatory RNAs [J].
Brameier, Markus ;
Herwig, Astrid ;
Reinhardt, Richard ;
Walter, Lutz ;
Gruber, Jens .
NUCLEIC ACIDS RESEARCH, 2011, 39 (02) :675-686
[8]  
Brennecke J, 2007, CELL, V128, P1089, DOI 10.1016/j.cell.2007.01.043
[9]   Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing [J].
Buhler, Marc ;
Verdel, André ;
Moazed, Danesh .
CELL, 2006, 125 (05) :873-886
[10]   Cyclin-dependent Kinase 9 Links RNA Polymerase II Transcription to Processing of Ribosomal RNA [J].
Burger, Kaspar ;
Muehl, Bastian ;
Rohrmoser, Michaela ;
Coordes, Britta ;
Heidemann, Martin ;
Kellner, Markus ;
Gruber-Eber, Anita ;
Heissmeyer, Vigo ;
Straesser, Katja ;
Eick, Dirk .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2013, 288 (29) :21173-21183