Structure of a Glomulin-RBX1-CUL1 Complex: Inhibition of a RING E3 Ligase through Masking of Its E2-Binding Surface

被引:65
|
作者
Duda, David M. [1 ,2 ]
Olszewski, Jennifer L. [1 ]
Tron, Adriana E. [4 ,5 ,6 ]
Hammel, Michal [7 ]
Lambert, Lester J. [1 ]
Waddell, M. Brett [3 ]
Mittag, Tanja [1 ]
DeCaprio, James A. [4 ,5 ,6 ]
Schulman, Brenda A. [1 ,2 ]
机构
[1] St Jude Childrens Res Hosp, Dept Biol Struct, Memphis, TN 38105 USA
[2] St Jude Childrens Res Hosp, Howard Hughes Med Inst, Memphis, TN 38105 USA
[3] St Jude Childrens Res Hosp, Hartwell Ctr Bioinformat & Biotechnol, Memphis, TN 38105 USA
[4] Dana Farber Canc Inst, Dept Med Oncol, Boston, MA 02215 USA
[5] Brigham & Womens Hosp, Dept Med, Boston, MA 02115 USA
[6] Harvard Univ, Sch Med, Boston, MA 02115 USA
[7] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Phys Biosci Div, Berkeley, CA 94720 USA
关键词
MITOTIC CHECKPOINT COMPLEX; SCFCDC4 UBIQUITIN LIGASE; GLOMUVENOUS MALFORMATIONS; SUBSTRATE RECOGNITION; CONFORMATIONAL-CHANGE; ALLOSTERIC INHIBITOR; SCF; ACTIVATION; GLOMULIN; BINDING;
D O I
10.1016/j.molcel.2012.05.044
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The approximately 300 human cullin-RING ligases (CRLs) are multisubunit E3s in which a RING protein, either RBX1 or RBX2, recruits an E2 to catalyze ubiquitination. RBX1-containing CRLs also can bind Glomulin (GLMN), which binds RBX1's RING domain, regulates the RBX1-CUL1-containing SCFFBW7 complex, and is disrupted in the disease Glomuvenous Malformation. Here we report the crystal structure of a complex between GLMN, RBX1, and a fragment of CUL1. Structural and biochemical analyses reveal that GLMN adopts a HEAT-like repeat fold that tightly binds the E2-interacting surface of RBX1, inhibiting CRL-mediated chain formation by the E2 CDC34. The structure explains the basis for GLMN's selectivity toward RBX1 over RBX2, and how disease-associated mutations disrupt GLMN-RBX1 interactions. Our study reveals a mechanism for RING E3 ligase regulation, whereby an inhibitor blocks E2 access, and raises the possibility that other E3s are likewise controlled by cellular proteins that mask E2-binding surfaces to mediate inhibition.
引用
收藏
页码:371 / 382
页数:12
相关论文
共 50 条
  • [31] Mechanistic insights into the enzymatic activity of E3 ligase HOIL-1L and its regulation by the linear ubiquitin chain binding
    Xu, Xiaolong
    Wang, Yaru
    Zhang, Yan
    Wang, Yingli
    Yin, Yue
    Peng, Chao
    Gong, Xinyu
    Li, Miao
    Zhang, Yuchao
    Zhang, Mingfang
    Tang, Yubin
    Zhou, Xindi
    Liu, Haobo
    Pan, Lifeng
    SCIENCE ADVANCES, 2023, 9 (41)
  • [32] AKT Phosphorylates FAM13A and Promotes Its Degradation via CUL4A/DDB1/DCAF1 E3 Complex
    Gong, Lu
    Bates, Samuel
    Li, Yujun
    Lin, Xin
    Wei, Wenyi
    Zhou, Xiaobo
    AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY, 2023, 68 (05) : 577 - 590
  • [33] The E3 ligase HOIP specifies linear ubiquitin chain assembly through its RING-IBR-RING domain and the unique LDD extension
    Smit, Judith J.
    Monteferrario, Davide
    Noordermeer, Sylvie M.
    van Dijk, Willem J.
    van der Reijden, Bert A.
    Sixma, Titia K.
    EMBO JOURNAL, 2012, 31 (19) : 3833 - 3844
  • [34] ATRA protects skin fibroblasts against UV-induced oxidative damage through inhibition of E3 ligase Hrd1
    Cheng, Xianye
    Qian, Wen
    Chen, Fang
    Jin, Yi
    Wang, Fengdi
    Lu, Xiaoyi
    Lee, Sae Rom
    Su, Dongming
    Chen, Bin
    MOLECULAR MEDICINE REPORTS, 2019, 20 (03) : 2294 - 2302
  • [35] The RING-finger ubiquitin E3 ligase TaPIR1 targets TaHRP1 for degradation to suppress chloroplast function
    Zhang, Rongrong
    Wu, Yu
    Qu, Xiangru
    Yang, Wenjuan
    Wu, Qin
    Huang, Lin
    Jiang, Qiantao
    Ma, Jian
    Zhang, Yazhou
    Qi, Pengfei
    Chen, Guoyue
    Jiang, Yunfeng
    Zheng, Youliang
    Wang, Xiaojie
    Wei, Yuming
    Xu, Qiang
    NATURE COMMUNICATIONS, 2024, 15 (01)
  • [36] Human melanocortin 1 receptor-mediated ubiquitination of nonvisual arrestins. Role of Mahogunin Ring Finger 1 E3 ligase
    Abrisqueta, Marta
    Olivares, Concepcion
    Herraiz, Cecilia
    Castejon-Grinan, Maria
    Sires-Campos, Julia
    Garcia-Borron, Jose C.
    Jimenez-Cervantes, Celia
    BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 2018, 1865 (01): : 76 - 94
  • [37] ROC1/RBX1 E3 Ubiquitin Ligase Silencing Suppresses Tumor Cell Growth via Sequential Induction of G2-M Arrest, Apoptosis, and Senescence
    Jia, Lijun
    Soengas, Maria S.
    Sun, Yi
    CANCER RESEARCH, 2009, 69 (12) : 4974 - 4982
  • [38] Electron microscopy structure of human APC/CCDH1-EMI1 reveals multimodal mechanism of E3 ligase shutdown
    Frye, Jeremiah J.
    Brown, Nicholas G.
    Petzold, Georg
    Watson, Edmond R.
    Grace, Christy R. R.
    Nourse, Amanda
    Jarvis, Marc A.
    Kriwacki, Richard W.
    Peters, Jan-Michael
    Stark, Holger
    Schulman, Brenda A.
    NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2013, 20 (07) : 827 - +
  • [39] PICK1 inhibits the E3 ubiquitin ligase activity of Parkin and reduces its neuronal protective effect
    He, Jing
    Xia, Mengying
    Yeung, Patrick K. K.
    Li, Jiahua
    Li, Zhifang
    Chung, Kenny K.
    Chung, Sookja K.
    Xia, Jun
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 115 (30) : E7193 - E7201
  • [40] Structure of the Siz/PIAS SUMO E3 Ligase Siz1 and Determinants Required for SUMO Modification of PCNA
    Yunus, Ali A.
    Lima, Christopher D.
    MOLECULAR CELL, 2009, 35 (05) : 669 - 682