Chemical Protein Synthesis Enabled Mechanistic Studies on the Molecular Recognition of K27-linked Ubiquitin Chains

被引:63
作者
Pan, Man [1 ,4 ]
Zheng, Qingyun [1 ]
Ding, Shan [2 ]
Zhang, Lujia [3 ]
Qu, Qian [1 ]
Wang, Tian [1 ]
Hong, Danning [2 ]
Ren, Yujing [2 ]
Liang, Lujun [1 ]
Chen, Chunlai [3 ]
Mei, Ziqing [2 ]
Liu, Lei [1 ,4 ]
机构
[1] Tsinghua Univ, Tsinghua Peking Ctr Life Sci, MOE Key Lab Bioorgan Phosphorus Chem & Chem Biol, Dept Chem,Ctr Synthet & Syst Biol, Beijing 100084, Peoples R China
[2] Chinese Acad Agr Sci, Biotechnol Res Inst, Beijing 100081, Peoples R China
[3] Tsinghua Univ, Sch Life Sci, Beijing Adv Innovat Ctr Struct Biol, Beijing 100084, Peoples R China
[4] Tsinghua Univ, Grad Sch Shenzen, Key Lab Chem Biol, State Key Lab Chem Oncogen, Shenzhen 518055, Guangdong, Peoples R China
关键词
chemical protein synthesis; native chemical ligation; smFRET; ubiquitin; x-ray crystallography; CYSTEINE; DEHYDROALANINE; PEPTIDES; LINKAGE;
D O I
10.1002/anie.201810814
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
New synthetic strategies that exploited the strengths of both chemoselective ligation and recombinant protein expression were developed to prepare K27 di-ubiquitins (diUb), which enabled mechanistic studies on the molecular recognition of K27-linked Ubs by single-molecule Forster resonance energy transfer (smFRET) and X-ray crystallography. The results revealed that free K27 diUb adopted a compact conformation, whereas upon binding to UCHL3, K27 diUb was remodeled to an open conformation. The K27 isopeptide bond remained rigidly buried inside the diUb moiety during binding, an interesting unique structural feature that may explain the distinctive biological function of K27 Ub chains.
引用
收藏
页码:2627 / 2631
页数:5
相关论文
共 39 条
  • [1] Cysteine Promoted C-Terminal Hydrazinolysis of Native Peptides and Proteins
    Adams, Anna L.
    Cowper, Ben
    Morgan, Rachel E.
    Premdjee, Bhavesh
    Caddick, Stephen
    Macmillan, Derek
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2013, 52 (49) : 13062 - 13066
  • [2] The Ball and Chain of Polyubiquitin Structures
    Alfano, Caterina
    Faggiano, Serena
    Pastore, Annalisa
    [J]. TRENDS IN BIOCHEMICAL SCIENCES, 2016, 41 (04) : 371 - 385
  • [3] [Anonymous], 2010, Angew Chem
  • [4] Total chemical and semisynthetic approaches for the preparation of ubiquitinated proteins and their applications
    Bi, Xiaobao
    Pasunooti, Kalyan Kumar
    Liu, Chuan-Fa
    [J]. SCIENCE CHINA-CHEMISTRY, 2018, 61 (03) : 251 - 265
  • [5] Bondalapati S, 2016, NAT CHEM, V8, P407, DOI [10.1038/NCHEM.2476, 10.1038/nchem.2476]
  • [6] Linkage via K27 Bestows Ubiquitin Chains with Unique Properties among Polyubiquitins
    Castaneda, Carlos A.
    Dixon, Emma K.
    Walker, Olivier
    Chaturvedi, Apurva
    Nakasone, Mark A.
    Curtis, Joseph E.
    Reed, Megan R.
    Krueger, Susan
    Cropp, T. Ashton
    Fushman, David
    [J]. STRUCTURE, 2016, 24 (03) : 423 - 436
  • [7] Conversion of Cysteine into Dehydroalanine Enables Access to Synthetic Histones Bearing Diverse Post-Translational Modifications
    Chalker, Justin M.
    Lercher, Lukas
    Rose, Nathan R.
    Schofield, Christopher J.
    Davis, Benjamin G.
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2012, 51 (08) : 1835 - 1839
  • [8] Conversion of Cysteine into Dehydroalanine Enables Access to Synthetic Histones Bearing Diverse Post-Translational Modifications
    Chalker, Justin M.
    Lercher, Lukas
    Rose, Nathan R.
    Schofield, Christopher J.
    Davis, Benjamin G.
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2012, 51 (08) : 1835 - 1839
  • [9] Methods for converting cysteine to dehydroalanine on peptides and proteins
    Chalker, Justin M.
    Gunnoo, Smita B.
    Boutureira, Omar
    Gerstberger, Stefanie C.
    Fernandez-Gonzalez, Marta
    Bernardes, Goncalo J. L.
    Griffin, Laura
    Hailu, Hanna
    Schofield, Christopher J.
    Davis, Benjamin G.
    [J]. CHEMICAL SCIENCE, 2011, 2 (09) : 1666 - 1676
  • [10] SYNTHESIS OF PROTEINS BY NATIVE CHEMICAL LIGATION
    DAWSON, PE
    MUIR, TW
    CLARKLEWIS, I
    KENT, SBH
    [J]. SCIENCE, 1994, 266 (5186) : 776 - 779