Recruitment of UvrBC complexes to UV-induced damage in the absence of UvrA increases cell survival

被引:15
作者
Springall, Luke [1 ]
Hughes, Craig D. [2 ]
Simons, Michelle [3 ]
Azinas, Stavros [3 ]
Van Houten, Bennett [4 ]
Kad, Neil M. [1 ]
机构
[1] Univ Kent, Sch Biol Sci, Canterbury CT2 7NH, Kent, England
[2] Univ Cambridge, Dept Vet Med, Cambridge CB3 0ES, England
[3] Univ Essex, Sch Biol Sci, Colchester CO4 3SQ, Essex, England
[4] UPMC, Hillman Canc Ctr, Pittsburgh, PA 15213 USA
基金
美国国家卫生研究院; 英国生物技术与生命科学研究理事会;
关键词
NUCLEOTIDE EXCISION-REPAIR; ESCHERICHIA-COLI UVRA; DNA-POLYMERASE-I; MOLECULE IMAGING REVEALS; ATOMIC-FORCE MICROSCOPY; HELICASE-II; ENDONUCLEASE ACTIVITY; PYRIMIDINE DIMERS; CRYSTAL-STRUCTURE; GENE-PRODUCT;
D O I
10.1093/nar/gkx1244
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Nucleotide excision repair (NER) is the primary mechanism for removal of ultraviolet light (UV)-induced DNA photoproducts and is mechanistically conserved across all kingdoms of life. Bacterial NER involves damage recognition by UvrA(2) and UvrB, followed by UvrC-mediated incision either side of the lesion. Here, using a combination of in vitro and in vivo single-molecule studies we show that a UvrBC complex is capable of lesion identification in the absence of UvrA. Single-molecule analysis of eGFP-labelled UvrB and UvrC in living cells showed that UV damage caused these proteins to switch from cytoplasmic diffusion to stable complexes on DNA. Surprisingly, ectopic expression of UvrC in a uvrA deleted strain increased UV survival. These data provide evidence for a previously unrealized mechanism of survival that can occur through direct lesion recognition by a UvrBC complex.
引用
收藏
页码:1256 / 1265
页数:10
相关论文
共 62 条
[1]   Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants:: the Keio collection [J].
Baba, Tomoya ;
Ara, Takeshi ;
Hasegawa, Miki ;
Takai, Yuki ;
Okumura, Yoshiko ;
Baba, Miki ;
Datsenko, Kirill A. ;
Tomita, Masaru ;
Wanner, Barry L. ;
Mori, Hirotada .
MOLECULAR SYSTEMS BIOLOGY, 2006, 2 (1) :2006.0008
[2]   INVOLVEMENT OF HELICASE-II (UVRD GENE-PRODUCT) AND DNA-POLYMERASE-I IN EXCISION MEDIATED BY THE UVRABC PROTEIN COMPLEX [J].
CARON, PR ;
KUSHNER, SR ;
GROSSMAN, L .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1985, 82 (15) :4925-4929
[3]   INCISION OF DAMAGED VERSUS NONDAMAGED DNA BY THE ESCHERICHIA-COLI UVRABC PROTEINS [J].
CARON, PR ;
GROSSMAN, L .
NUCLEIC ACIDS RESEARCH, 1988, 16 (16) :7855-7865
[4]   Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells [J].
Chen, Jiji ;
Zhang, Zhengjian ;
Li, Li ;
Chen, Bi-Chang ;
Revyakin, Andrey ;
Hajj, Bassam ;
Legant, Wesley ;
Dahan, Maxime ;
Lionnet, Timothee ;
Betzig, Eric ;
Tjian, Robert ;
Liu, Zhe .
CELL, 2014, 156 (06) :1274-1285
[5]   The C-terminal zinc finger of UvrA does not bind DNA directly but regulates damage-specific DNA binding [J].
Croteau, Deborah L. ;
DellaVecchia, Matthew J. ;
Wang, Hong ;
Bienstock, Rachelle J. ;
Melton, Mark A. ;
Van Houten, Bennett .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (36) :26370-26381
[6]   Induction of the SOS response increases the efficiency of global nucleotide excision repair of cyclobutane pyrimidine dimers, but not 6-4 photoproducts, in UV-irradiated Escherichia coli [J].
Crowley, DJ ;
Hanawalt, PC .
JOURNAL OF BACTERIOLOGY, 1998, 180 (13) :3345-3352
[7]   Analyzing the handoff of DNA from UvrA to UvrB utilizing DNA-protein photoaffinity labeling [J].
DellaVecchia, MJ ;
Croteau, DL ;
Skorvaga, M ;
Dezhurov, SV ;
Lavrik, OI ;
Van Houten, B .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (43) :45245-45256
[8]   Quantification of DNA-associated proteins inside eukaryotic cells using single-molecule localization microscopy [J].
Etheridge, Thomas J. ;
Boulineau, Remi L. ;
Herbert, Alex ;
Watson, Adam T. ;
Daigaku, Yasukazu ;
Tucker, Jem ;
George, Sophie ;
Joensson, Peter ;
Palayret, Matthieu ;
Lando, David ;
Laue, Ernest ;
Osborne, Mark A. ;
Klenerman, David ;
Lee, Steven F. ;
Carr, Antony M. .
NUCLEIC ACIDS RESEARCH, 2014, 42 (19)
[9]  
FRANKLIN WA, 1982, J BIOL CHEM, V257, P13535
[10]   Single-molecule analysis reveals human UV-damaged DNA-binding protein (UV-DDB) dimerizes on DNA via multiple kinetic intermediates [J].
Ghodke, Harshad ;
Wang, Hong ;
Hsieh, Ching L. ;
Woldemeskel, Selamawit ;
Watkins, Simon C. ;
Rapic-Otrin, Vesna ;
Van Houten, Bennett .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (18) :E1862-E1871