Thermophilic bacteria are potential sources of novel Rieske non-heme iron oxygenases

被引:6
|
作者
Chakraborty, Joydeep [1 ]
Suzuki-Minakuchi, Chiho [1 ]
Okada, Kazunori [1 ]
Nojiri, Hideaki [1 ]
机构
[1] Univ Tokyo, Biotechnol Res Ctr, Bunkyo Ku, 1-1-1 Yayoi, Tokyo, Japan
来源
AMB EXPRESS | 2017年 / 7卷
基金
日本学术振兴会;
关键词
Rieske non-heme iron oxygenase; Oxidoreductase; Thermophiles; Aromatic hydrocarbons; Biotransformation; AROMATIC-HYDROCARBONS; TOLUENE DIOXYGENASE; GENES; BIODEGRADATION; BIOREMEDIATION; BIOSYNTHESIS; NAPHTHALENE; PROTEINS; IDENTIFICATION; METAGENOMICS;
D O I
10.1186/s13568-016-0318-5
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Rieske non-heme iron oxygenases, which have a Rieske-type [2Fe-2S] cluster and a non-heme catalytic iron center, are an important family of oxidoreductases involved mainly in regio- and stereoselective transformation of a wide array of aromatic hydrocarbons. Though present in all domains of life, the most widely studied Rieske non-heme iron oxygenases are found in mesophilic bacteria. The present study explores the potential for isolating novel Rieske non-heme iron oxygenases from thermophilic sources. Browsing the entire bacterial genome database led to the identification of 45 homologs from thermophilic bacteria distributed mainly among Chloroflexi, Deinococcus-Thermus and Firmicutes. Thermostability, measured according to the aliphatic index, showed higher values for certain homologs compared with their mesophilic relatives. Prediction of substrate preferences indicated that a wide array of aromatic hydrocarbons could be transformed by most of the identified oxygenase homologs. Further identification of putative genes encoding components of a functional oxygenase system opens up the possibility of reconstituting functional thermophilic Rieske non-heme iron oxygenase systems with novel properties.
引用
收藏
页数:15
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