Metabonomics in pharmaceutical discovery and development

被引:74
作者
Robertson, Donald G. [1 ]
Reily, Michael D. [1 ]
Baker, J. David [1 ]
机构
[1] Pfizer Global Res & Dev, Metabon Evaluat Grp, Ann Arbor, MI 48105 USA
关键词
metabonomics; NMR spectroscopy; mass spectrometry; chemometrics; pharmaceutical development;
D O I
10.1021/pr060535c
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Metabonomics has emerged as a key technology in pharmaceutical discovery and development, evolving as the small molecule counterpart of transcriptomics and proteomics. In drug discovery laboratories, metabonomics aids in target identification, phenotyping, and the understanding of the biochemical basis of disease and toxicity. This review focuses on three areas where metabonomics is used in the industry: (1) analytical considerations, (2) chemometric and statistical concerns, and (3) biological aspects and applications.
引用
收藏
页码:526 / 539
页数:14
相关论文
共 163 条
[1]   STUDIES ON THE EFFECTS OF L(ALPHA-S,5S)-ALPHA- AMINO-3-CHLORO-4,5-DIHYDRO-5-ISOXAZOLEACETIC ACID (AT-125) ON 4-AMINOPHENOL-INDUCED NEPHROTOXICITY IN THE FISCHER-344 RAT [J].
ANTHONY, ML ;
BEDDELL, CR ;
LINDON, JC ;
NICHOLSON, JK .
ARCHIVES OF TOXICOLOGY, 1993, 67 (10) :696-705
[2]   CLASSIFICATION OF TOXIN-INDUCED CHANGES IN H-1-NMR SPECTRA OF URINE USING AN ARTIFICIAL NEURAL-NETWORK [J].
ANTHONY, ML ;
ROSE, VS ;
NICHOLSON, JK ;
LINDON, JC .
JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS, 1995, 13 (03) :205-211
[3]   Batch statistical processing of 1H NMR-derived urinary spectral data [J].
Antti, H ;
Bollard, ME ;
Ebbels, T ;
Keun, H ;
Lindon, JC ;
Nicholson, JK ;
Holmes, E .
JOURNAL OF CHEMOMETRICS, 2002, 16 (8-10) :461-468
[4]   A combined 1H-NMR spectroscopy- and mass spectrometry-based metabolomic study of the PPAR-α null mutant mouse defines profound systemic changes in metabolism linked to the metabolic syndrome [J].
Atherton, Helen J. ;
Bailey, Nigel J. ;
Zhang, Wen ;
Taylor, John ;
Major, Hilary ;
Shockcor, John ;
Clarke, Kieran ;
Griffin, Julian L. .
PHYSIOLOGICAL GENOMICS, 2006, 27 (02) :178-186
[5]   In biomarkers we trust? [J].
Baker, M .
NATURE BIOTECHNOLOGY, 2005, 23 (03) :297-304
[6]   Partial least squares for discrimination [J].
Barker, M ;
Rayens, W .
JOURNAL OF CHEMOMETRICS, 2003, 17 (03) :166-173
[7]   Nuclear magnetic resonance spectroscopic and principal components analysis investigations into biochemical effects of three model hepatotoxins [J].
Beckwith-Hall, BM ;
Nicholson, JK ;
Nicholls, AW ;
Foxall, PJD ;
Lindon, JC ;
Connor, SC ;
Abdi, M ;
Connelly, J ;
Holmes, E .
CHEMICAL RESEARCH IN TOXICOLOGY, 1998, 11 (04) :260-272
[8]   CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING [J].
BENJAMINI, Y ;
HOCHBERG, Y .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) :289-300
[9]   An NMR-based metabolomic approach to assess metabolism in splanchnic tissues of steers [J].
Bertram, HC ;
Kristensen, NB ;
Malmendal, A ;
Nielsen, NC ;
Jensen, SK ;
Harmon, DL .
JOURNAL OF ANIMAL AND FEED SCIENCES, 2004, 13 :295-298
[10]   The agony and ecstasy of "OMIC" technologies in drug development [J].
Bilello, JA .
CURRENT MOLECULAR MEDICINE, 2005, 5 (01) :39-52