Structure of Spo0M, a sporulation-control protein from Bacillus subtilis

被引:2
作者
Sonoda, Yo [1 ]
Mizutani, Kimihiko [1 ]
Mikami, Bunzo [1 ]
机构
[1] Kyoto Univ, Grad Sch Agr, Div Appl Life Sci, Lab Appl Struct Biol, Uji, Kyoto 6110011, Japan
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2015年 / 71卷
关键词
sporulation-control protein; Spo0M; arrestin; FP domain; PI31; CRYSTAL-STRUCTURE; RECEPTOR-BINDING; ARRESTIN FOLD; FTSH GENE; DOMAIN; THROUGHPUT; STABILITY; ANGSTROM;
D O I
10.1107/S2053230X15020919
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Spo0M is a sporulation-control protein that is thought to play an essential role in the early stage of endospore formation. While little is known about the functions of Spo0M, a recent phylogenetic study suggests that, based on its amino-acid sequence, Spo0M might belong to the arrestin clan. The crystal structure of the Spo0M protein was determined at a resolution of 2.3 angstrom. Ten amino acids at the end of the N-terminus were removed to improve the thermal stability of the purified Spo0M protein and the crystal structure of Spo0M was determined by SAD. Spo0M has a well conserved N-terminal domain with an arrestin-like fold, which consists of a beta-strand sandwich structure. Surprisingly, the C-terminal domain of Spo0M, which has no structural homology to arrestinclan proteins, bears significant structural similarity to the FP domain of the human PI31 protein. In addition, Spo0M harbours a potential polar-core structure connecting the N- and C-terminal domains with several salt bridges, as seen in the crystal structures of arrestin and VPS26. The structure reported here constitutes the first structural information on a bacterial protein that shares significant structural homology to members of the arrestin clan and the FP domain.
引用
收藏
页码:1488 / 1497
页数:10
相关论文
共 45 条
  • [1] PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution
    Adams, Paul D.
    Afonine, Pavel V.
    Bunkoczi, Gabor
    Chen, Vincent B.
    Davis, Ian W.
    Echols, Nathaniel
    Headd, Jeffrey J.
    Hung, Li-Wei
    Kapral, Gary J.
    Grosse-Kunstleve, Ralf W.
    McCoy, Airlie J.
    Moriarty, Nigel W.
    Oeffner, Robert
    Read, Randy J.
    Richardson, David C.
    Richardson, Jane S.
    Terwilliger, Thomas C.
    Zwart, Peter H.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 : 213 - 221
  • [2] On the origins of arrestin and rhodopsin
    Alvarez, Carlos E.
    [J]. BMC EVOLUTIONARY BIOLOGY, 2008, 8 (1)
  • [3] The Arrestin Fold: Variations on a Theme
    Aubry, Laurence
    Guetta, Dorian
    Klein, Gerard
    [J]. CURRENT GENOMICS, 2009, 10 (02) : 133 - 142
  • [4] Structures of bovine, equine and leporine serum albumin
    Bujacz, Anna
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2012, 68 : 1278 - 1289
  • [5] MolProbity: all-atom structure validation for macromolecular crystallography
    Chen, Vincent B.
    Arendall, W. Bryan, III
    Headd, Jeffrey J.
    Keedy, Daniel A.
    Immormino, Robert M.
    Kapral, Gary J.
    Murray, Laura W.
    Richardson, Jane S.
    Richardson, David C.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 : 12 - 21
  • [6] The ftsH gene of Bacillus subtilis is involved in major cellular processes such as sporulation, stress adaptation and secretion
    Deuerling, E
    Mogk, A
    Richter, C
    Purucker, M
    Schumann, W
    [J]. MOLECULAR MICROBIOLOGY, 1997, 23 (05) : 921 - 933
  • [7] Features and development of Coot
    Emsley, P.
    Lohkamp, B.
    Scott, W. G.
    Cowtan, K.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2010, 66 : 486 - 501
  • [8] Thermofluor-based high-throughput stability optimization of proteins for structural studies
    Ericsson, Ulrika B.
    Hallberg, B. Martin
    DeTitta, George T.
    Dekker, Niek
    Nordlund, Par
    [J]. ANALYTICAL BIOCHEMISTRY, 2006, 357 (02) : 289 - 298
  • [9] The transcriptional profile of early to middle sporulation in Bacillus subtilis
    Fawcett, P
    Eichenberger, P
    Losick, R
    Youngman, P
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (14) : 8063 - 8068
  • [10] Crystal structure of β-arrestin at 1.9 Å:: Possible mechanism of receptor binding and membrane translocation
    Han, M
    Gurevich, VV
    Vishnivetskiy, SA
    Sigler, PB
    Schubert, C
    [J]. STRUCTURE, 2001, 9 (09) : 869 - 880