Fungal Community Ecology Using MALDI-TOF MS Demands Curated Mass Spectral Databases

被引:13
作者
Lima, Matheus Sanita [1 ,2 ]
de Lucas, Rosymar Coutinho [2 ]
Lima, Nelson [3 ]
Teixeira de Moraes Polizeli, Maria de Lourdes [2 ]
Santos, Cledir [4 ]
机构
[1] Univ Western Ontario, Dept Biol, London, ON, Canada
[2] Univ Sao Paulo, Biol Dept, Fac Philosophy Sci & Letters Ribeirao Preto, Ribeirao Preto, Brazil
[3] Univ Minho, CEB Biol Engn Ctr, Braga, Portugal
[4] Univ La Frontera, BIOREN UFRO, Dept Chem Sci & Nat Resources, Temuco, Chile
基金
巴西圣保罗研究基金会;
关键词
MALDI-TOF MS; fungal community ecology; fungal biodiversity; microbial Biological Resource Centers; mass spectral databases; culturomics; eukaryotic microbial communities; high-throughput species identification; SPECIES RECOGNITION; IDENTIFICATION; BIODIVERSITY; ASPERGILLUS; SPECTROMETRY; MODELS;
D O I
10.3389/fmicb.2019.00315
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
引用
收藏
页数:4
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共 49 条
[1]   Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for fast and accurate identification of clinically relevant Aspergillus species [J].
Alanio, A. ;
Beretti, J. -L. ;
Dauphin, B. ;
Mellado, E. ;
Quesne, G. ;
Lacroix, C. ;
Amara, A. ;
Berche, P. ;
Nassif, X. ;
Bougnoux, M. -E. .
CLINICAL MICROBIOLOGY AND INFECTION, 2011, 17 (05) :750-755
[2]   Invertebrate models of fungal infection [J].
Arvanitis, Marios ;
Glavis-Bloom, Justin ;
Mylonakis, Eleftherios .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE, 2013, 1832 (09) :1378-1383
[3]   Sequence-Based Identification of Aspergillus, Fusarium, and Mucorales Species in the Clinical Mycology Laboratory: Where Are We and Where Should We Go from Here? [J].
Balajee, S. A. ;
Borman, A. M. ;
Brandt, M. E. ;
Cano, J. ;
Cuenca-Estrella, M. ;
Dannaoui, E. ;
Guarro, J. ;
Haase, G. ;
Kibbler, C. C. ;
Meyer, W. ;
O'Donnell, K. ;
Petti, C. A. ;
Rodriguez-Tudela, J. L. ;
Sutton, D. ;
Velegraki, A. ;
Wickes, B. L. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2009, 47 (04) :877-884
[4]   Toward understanding, managing, and protecting microbial ecosystems [J].
Bodelier, Paul L. E. .
FRONTIERS IN MICROBIOLOGY, 2011, 2
[5]   Hidden Killers: Human Fungal Infections [J].
Brown, Gordon D. ;
Denning, David W. ;
Gow, Neil A. R. ;
Levitz, Stuart M. ;
Netea, Mihai G. ;
White, Theodore C. .
SCIENCE TRANSLATIONAL MEDICINE, 2012, 4 (165)
[6]   Pioneering fungi from the Damma glacier forefield in the Swiss Alps can promote granite weathering [J].
Brunner, I. ;
Ploetze, M. ;
Rieder, S. ;
Zumsteg, A. ;
Furrer, G. ;
Frey, B. .
GEOBIOLOGY, 2011, 9 (03) :266-279
[7]   Matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry applied to virus identification [J].
Calderaro, Adriana ;
Arcangeletti, Maria-Cristina ;
Rodighiero, Isabella ;
Buttrini, Mirko ;
Gorrini, Chiara ;
Motta, Federica ;
Germini, Diego ;
Medici, Maria-Cristina ;
Chezzi, Carlo ;
De Conto, Flora .
SCIENTIFIC REPORTS, 2014, 4
[8]   Understanding the Role of the Master Regulator XYR1 in Trichoderma reesei by Global Transcriptional Analysis [J].
Castro, Lilian dos Santos ;
de Paula, Renato G. ;
Antonieto, Amanda C. C. ;
Persinoti, Gabriela F. ;
Silva-Rocha, Rafael ;
Silva, Roberto N. .
FRONTIERS IN MICROBIOLOGY, 2016, 7
[9]   Increasing Metagenomic Resolution of Microbiome Interactions Through Functional Phylogenomics and Bacterial Sub-Communities [J].
Cibrian-Jaramillo, Angelica ;
Barona-Gomez, Francisco .
FRONTIERS IN GENETICS, 2016, 7
[10]   Secondary metabolite profiling, growth profiles and other tools for species recognition and important Aspergillus mycotoxins [J].
Frisvad, J. C. ;
Larsen, T. O. ;
de Vries, R. ;
Meijer, M. ;
Houbraken, J. ;
Cabanes, F. J. ;
Ehrlich, K. ;
Samson, R. A. .
STUDIES IN MYCOLOGY, 2007, (59) :31-37