QSAR Study of Curcumine Derivatives as HIV-1 Integrase Inhibitors

被引:0
作者
Gupta, Pawan [1 ]
Sharma, Anju [2 ]
Garg, Prabha [1 ,2 ]
Roy, Nilanjan [3 ]
机构
[1] NIPER, Dept Pharmacoinformat, Sas Nagar 160062, Punjab, India
[2] NIPER, Ctr Comp, Sas Nagar 160062, Punjab, India
[3] NIPER, Dept Biotechnol, Sas Nagar 160062, Punjab, India
关键词
HIV-1; integrase; curcumine derivatives; descriptors; 2D-QSAR; applicability domain; STYRYLQUINOLINE DERIVATIVES; REGRESSION-MODELS; DISCOVERY; VALIDATION; DESIGN; QSPR;
D O I
10.2174/157340913804998793
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
A QSAR study was performed on curcumine derivatives as HIV-1 integrase inhibitors using multiple linear regression. The statistically significant model was developed with squared correlation coefficients (r(2)) 0.891 and cross validated r(2) (r(cv)(2)) 0.825. The developed model revealed that electronic, shape, size, geometry, substitution's information and hydrophilicity were important atomic properties for determining the inhibitory activity of these molecules. The model was also tested successfully for external validation (r(pred)(2) = 0.849) as well as Tropsha's test for model predictability. Furthermore, the domain analysis was carried out to evaluate the prediction reliability of external set molecules. The model was statistically robust and had good predictive power which can be successfully utilized for screening of new molecules.
引用
收藏
页码:141 / 150
页数:10
相关论文
共 55 条
[1]   A novel QSAR model for predicting the inhibition of CXCR3 receptor by 4-N-aryl-[1,4] diazepane ureas [J].
Afantitis, Antreas ;
Melagraki, Georgia ;
Sarimveis, Haralambos ;
Igglessi-Markopoulou, Olga ;
Kollias, George .
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2009, 44 (02) :877-884
[2]   Molecular modelling and QSAR in the discovery of HIV-1 integrase inhibitors [J].
Almerico, Anna M. ;
Tutone, Marco ;
Ippolito, Mario ;
Lauria, Antonino .
CURRENT COMPUTER-AIDED DRUG DESIGN, 2007, 3 (03) :214-233
[3]   The better predictive model:: High q2 for the training set or low root mean square error of prediction for the test set? [J].
Aptula, AO ;
Jeliazkova, NG ;
Schultz, TW ;
Cronin, MTD .
QSAR & COMBINATORIAL SCIENCE, 2005, 24 (03) :385-396
[4]  
Atkinson Anthony Curtes, 1985, Plots, transformations and regression
[5]  
an introduction to graphical methods of diagnostic regression analysis
[6]   Design and synthesis of caffeoyl-anilides as portmanteau inhibitors f HIV-1 integrase and CCR5 [J].
Bodiwala, Hardik S. ;
Sabde, Sudeep ;
Gupta, Pawan ;
Mukherjee, Ruchira ;
Kumar, Rajender ;
Garg, Prabha ;
Bhutani, Kamlesh Kumar ;
Mitra, Debashis ;
Singh, Inder Pal .
BIOORGANIC & MEDICINAL CHEMISTRY, 2011, 19 (03) :1256-1263
[7]   Synthesis, anti-HIV-1 integrase, and cytotoxic activities of 4-chloro-N-(4-oxopyrimidin-2-yl)-2-mercaptobenzenesulfonamide derivatives [J].
Brzozowski, Zdzislaw ;
Slawinski, Jaroslaw ;
Saczewski, Franciszek ;
Sanchez, Tino ;
Neamati, Nouri .
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2008, 43 (06) :1188-1198
[8]   QSAR study of carboxylic acid derivatives as HIV-1 Integrase inhibitors [J].
Cheng, Zhengjun ;
Zhang, Yuntao ;
Fu, Weizhong .
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2010, 45 (09) :3970-3980
[9]  
Chernick M.R., 2003, Introductory Biostatistics for the Health Sciences, Modern Applications Including Bootstrap
[10]   Structure/response correlations and similarity/diversity analysis by GETAWAY descriptors. 1. Theory of the novel 3D molecular descriptors [J].
Consonni, V ;
Todeschini, R ;
Pavan, M .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2002, 42 (03) :682-692