Common Mechanisms Underlying Refractive Error Identified in Functional Analysis of Gene Lists From Genome-Wide Association Study Results in 2 European British Cohorts

被引:15
作者
Hysi, Pirro G. [1 ]
Mahroo, Omar A. [2 ,3 ]
Cumberland, Phillippa [4 ]
Wojciechowski, Robert [5 ]
Williams, Katie M. [2 ]
Young, Terri L. [6 ]
Mackey, David A. [7 ]
Rahi, Jugnoo S. [4 ]
Hammond, Christopher J. [1 ,2 ]
机构
[1] Kings Coll London, Dept Twin Res & Genet Epidemiol, London SE1 7EH, England
[2] Kings Coll London, Dept Ophthalmol, London SE1 7EH, England
[3] Univ Cambridge, Dept Physiol Dev & Neurosci, Cambridge, England
[4] UCL, Inst Child Hlth, Ctr Paediat Epidemiol & Biostat, London, England
[5] Johns Hopkins Bloomberg Sch Publ Hlth, Baltimore, MD USA
[6] Duke Univ, Med Ctr, Ctr Human Genet, Durham, NC USA
[7] Univ Western Australia, Lions Eye Inst, Ctr Ophthalmol & Visual Sci, Perth, WA 6009, Australia
基金
英国医学研究理事会; 英国惠康基金;
关键词
EYE GROWTH; SUSCEPTIBILITY LOCUS; GAP-JUNCTIONS; MYOPIA; CONNEXIN36; ROD; HERITABILITY; LOCALIZATION; EXPRESSION; CHILDREN;
D O I
10.1001/jamaophthalmol.2013.6022
中图分类号
R77 [眼科学];
学科分类号
100212 ;
摘要
IMPORTANC E To date, relatively few genes responsible for a fraction of heritability have been identified by means of large genetic association studies of refractive error. OBJECTIVE To explore the genetic mechanisms that lead to refractive error in the general population. DESIGN, SETTING, AND PARTICIPANTS Genome-wide association studies were carried out in 2 British population-based independent cohorts (N = 5928 participants) to identify genes moderately associated with refractive error. MAIN OUTCOMES AND MEASURES Enrichment analyses were used to identify sets of genes overrepresented in both cohorts. Enriched groups of genes were compared between both participating cohorts as a further measure against random noise. RESULTS Groups of genes enriched at highly significant statistical levels were remarkably consistent in both cohorts. In particular, these results indicated that plasma membrane (P = 7.64 x 10-3), cell-cell adhesion (P = 2.42 x 10-18), synaptic transmission (P = 2.70 x 10-14), calcium ion binding (P = 3.55 x 10-15), and cation channel activity (P = 2.77 x 10-14) were significantly overrepresented in relation to refractive error. CONCLUSION AND RELEVANCE These findings provide evidence that development of refractive error in the general population is related to the intensity of photosignal transduced from the retina, which may have implications for future interventions to minimize this disorder. Pathways connected to the procession of the nerve impulse are major mechanisms involved in the development of refractive error in populations of European origin.
引用
收藏
页码:50 / 56
页数:7
相关论文
共 45 条
[1]   Merlin-rapid analysis of dense genetic maps using sparse gene flow trees [J].
Abecasis, GR ;
Cherny, SS ;
Cookson, WO ;
Cardon, LR .
NATURE GENETICS, 2002, 30 (01) :97-101
[2]  
[Anonymous], 1925, STAT METHODS RES WOR
[3]  
BALDWIN WR, 1981, AM J OPTOM PHYS OPT, V58, P516
[4]   Connexin36 is essential for transmission of rod-mediated visual signals in the mammalian retina [J].
Deans, MR ;
Volgyi, B ;
Goodenough, DA ;
Bloomfield, SA ;
Paul, DL .
NEURON, 2002, 36 (04) :703-712
[5]   Localization of heterotypic gap junctions composed of connexin45 and connexin36 in the rod pathway of the mouse retina [J].
Dedek, Karin ;
Schultz, Konrad ;
Pieper, Mario ;
Dirks, Petra ;
Maxeiner, Stephan ;
Willecke, Klaus ;
Weiler, Reto ;
Janssen-Bienhold, Ulrike .
EUROPEAN JOURNAL OF NEUROSCIENCE, 2006, 24 (06) :1675-1686
[6]   DAVID: Database for annotation, visualization, and integrated discovery [J].
Dennis, G ;
Sherman, BT ;
Hosack, DA ;
Yang, J ;
Gao, W ;
Lane, HC ;
Lempicki, RA .
GENOME BIOLOGY, 2003, 4 (09)
[7]   Local changes in eye growth induced by imposed local refractive error despite active accommodation [J].
Diether, S ;
Schaeffel, F .
VISION RESEARCH, 1997, 37 (06) :659-668
[8]   A genome-wide association study of global gene expression [J].
Dixon, Anna L. ;
Liang, Liming ;
Moffatt, Miriam F. ;
Chen, Wei ;
Heath, Simon ;
Wong, Kenny C. C. ;
Taylor, Jenny ;
Burnett, Edward ;
Gut, Ivo ;
Farrall, Martin ;
Lathrop, G. Mark ;
Abecasis, Goncalo R. ;
Cookson, William O. C. .
NATURE GENETICS, 2007, 39 (10) :1202-1207
[9]  
Eong K. G. Au, 1993, Singapore Medical Journal, V34, P489
[10]   Expression of connexin36 in cone pedicles and OFF-cone bipolar cells of the mouse retina [J].
Feigenspan, A ;
Janssen-Bienhold, U ;
Hormuzdi, S ;
Monyer, H ;
Degen, J ;
Söhl, G ;
Willecke, K ;
Ammermüller, J ;
Weiler, R .
JOURNAL OF NEUROSCIENCE, 2004, 24 (13) :3325-3334