Characterization of the complete plastid genome of an endangered species Fortunearia sinensis (Hamamelidaceae)

被引:2
|
作者
Xu, Yong [1 ,2 ]
Xiao, Tian-Wen [1 ,2 ]
Zhao, Nan [1 ,2 ]
Li, Ting [1 ,2 ]
Liu, Tong-Jian [1 ,3 ]
Yan, Hai-Fei [1 ,3 ]
机构
[1] Chinese Acad Sci, South China Bot Garden, Key Lab Plant Resources Conservat & Sustainable U, Guangzhou 510650, Guangdong, Peoples R China
[2] Univ Chinese Acad Sci, Beijing, Peoples R China
[3] Chinese Acad Sci, Guangdong Prov Key Lab Appl Bot, South China Bot Garden, Guangzhou, Guangdong, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
基金
中国国家自然科学基金;
关键词
Fortunearia sinensis; plastome; Illumina sequencing; phylogenetic analysis;
D O I
10.1080/23802359.2019.1598813
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Fortunearia sinensis Rehder & E.H.Wilson, the only species of monotypic genus Fortunearia (Hamamelidaceae), is a native rare and vulnerable deciduous tree in China. In this study, the complete plastid genome of F. sinensis was determined using the Illumina paired-end sequencing data. The complete plastid genome of F. sinensis is 1,59,441 bp in length, consisting of a pair of inverted repeats (IR) regions (26,268 bp), a large-single copy (LSC) region (88,124 bp), and a small-single copy (SSC) region (18,781 bp). The plastid genome encodes 112 unique genes, including 80 protein-coding genes, 28 tRNA genes, and 4 rRNA genes. The phylogenetic analysis demonstrates a close relationship between F. sinensis and Sinowilsonia henryi.
引用
收藏
页码:1432 / 1434
页数:3
相关论文
共 50 条
  • [21] Characterization of the complete plastid genome sequence of eleutherococcus brachypus (araliaceae), an endangered shrub in China
    Ya-Juan Zhang
    Hong Gao
    Yuan Chen
    Feng-Xia Guo
    Gang Bai
    You-Yan Guo
    Fang Yan
    En-Jun Wang
    Conservation Genetics Resources, 2019, 11 : 295 - 297
  • [22] Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus
    Zhang, Chi
    Ma, Bo
    Gyurmey, Mey
    Liu, Haiping
    Wang, Wanliang
    Li, Baohai
    Zhang, Bianbian
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 309 - 310
  • [23] Characterization of the complete plastid genome of a Chinese endemic species Carya kweichowensis
    Ye, Linjiang
    Fu, Chaonan
    Wang, Yuehua
    Liu, Jie
    Gao, Lianming
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (02): : 492 - 493
  • [24] The complete plastid genome sequence of Neopicrorhiza scrophulariiflora (Plantaginaceae): an endangered species endemic to The Himalayas regions
    Zhang, Ying-Min
    Qian, Zi-Gang
    Zhang, Ai-Li
    Yang, Cong-Wei
    Li, Guo-Dong
    Liu, Xiao-Li
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2504 - 2505
  • [25] Characterization of the complete chloroplast genome of Aquilaria sinensis, an endangered agarwood-producing tree
    Deng, Xin
    Jiang, Zhenxing
    Jiang, Qingbin
    Guo, Wei
    Li, Yongquan
    Zhang, Xianzhi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 422 - 423
  • [26] Characterization of the complete chloroplast genome sequence of Sinowilsonia henryi (Hamamelidaceae)
    Tao Zhou
    Yuemei Zhao
    Guoqing Bai
    Xumei Wang
    Conservation Genetics Resources, 2018, 10 : 495 - 498
  • [27] Characterization of the complete chloroplast genome sequence of Sinowilsonia henryi (Hamamelidaceae)
    Zhou, Tao
    Zhao, Yuemei
    Bai, Guoqing
    Wang, Xumei
    CONSERVATION GENETICS RESOURCES, 2018, 10 (03) : 495 - 498
  • [28] Characterization and phylogenetic analysis of the complete chloroplast genome sequence of Disanthus cercidifolius subsp. longipes (Hamamelidaceae), a rare and endangered wild plant species in China
    Jiang, Ming
    Wang, Junfeng
    Zhang, Huijuan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1206 - 1207
  • [29] Characterization of the complete plastid genome of Acer tsinglingense, an endemic tree species in China
    Dong, Peng-Bin
    Liu, Yu
    Gao, Qi-Yuan
    Yang, Ting
    Chen, Xue-Yi
    Yang, Jia-Yu
    Shang, Qian-Han
    Fang, Min-Feng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 4065 - 4066
  • [30] Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii
    Ling, Qing
    Cheng, Longjie
    Li, Zhilin
    Zhao, Yiran
    Wang, Yuying
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 708 - 709