Crystal structure of plant pectin methylesterase

被引:111
作者
Johansson, K
El-Ahmad, M
Friemann, R
Jörnvall, H
Markovic, O
Eklund, H [1 ]
机构
[1] Swedish Univ Agr Sci, Dept Biol Mol, S-75124 Uppsala, Sweden
[2] Karolinska Inst, Dept Med Biochem & Biophys, S-17177 Stockholm, Sweden
[3] Slovak Acad Sci, Inst Chem, Bratislava 84238, Slovakia
关键词
crystal structure; beta-helix; pectin methylesterase; plant enzyme; catalytic mechanism; binding cleft;
D O I
10.1016/S0014-5793(02)02372-4
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Pectin is a principal component in the primary cell wall of plants. During cell development, pectin is modified by pectin methylesterases to give different properties to the cell wall. This report describes the first crystal structure of a plant pectin methylesterase. The P-helical structure embodies a central cleft, lined by several aromatic residues, that has been deduced to be suitable for pectin binding. The active site is found at the center of this cleft where Asp157 is suggested to act as the nucleophile, Asp136 as an acid/base and Gln113/Gln135 to form an anion hole to stabilize the transition state. (C) 2002 Federation of European Biochemical Societies. Published by Elsevier Science B.V. All rights reserved.
引用
收藏
页码:243 / 249
页数:7
相关论文
共 50 条
  • [1] CRYSTAL STRUCTURE OF PLANT PECTIN METHYLESTERASE
    Friemann, R.
    Johansson, K.
    El-Ahmad, M.
    Jornvall, H.
    Markovic, O.
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2002, 58 : C100 - C100
  • [2] Pectin methylesterase as a factor of plant transcriptome stability
    T. V. Gasanova
    E. V. Skurat
    O. Yu. Frolova
    M. A. Semashko
    Y. L. Dorokhov
    Molecular Biology, 2008, 42 : 421 - 429
  • [3] The Plant Invertase/Pectin Methylesterase Inhibitor Superfamily
    Coculo, Daniele
    Lionetti, Vincenzo
    FRONTIERS IN PLANT SCIENCE, 2022, 13
  • [4] The structure of rice weevil pectin methylesterase
    Teller, David C.
    Behnke, Craig A.
    Pappan, Kirk
    Shen, Zicheng
    Reese, John C.
    Reeck, Gerald R.
    Stenkamp, Ronald E.
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2014, 70 : 1480 - 1484
  • [5] Pectin methylesterase as a factor of plant transcriptome stability
    Gasanova, T. V.
    Skurat, E. V.
    Frolova, O. Yu.
    Semashko, M. A.
    Dorokhov, Y. L.
    MOLECULAR BIOLOGY, 2008, 42 (03) : 421 - 429
  • [6] Structure of a pectin methylesterase from Yersinia enterocolitica
    Boraston, Alisdair B.
    Abbott, D. Wade
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2012, 68 : 129 - 133
  • [7] Deesterification of pectin using commercial pectin methylesterase-containing plant extracts
    Frommhagen, Matthias
    Hutnik, Natalia
    Schols, Henk A.
    FOOD HYDROCOLLOIDS, 2025, 160
  • [8] Pectin methylesterase inhibitor
    Giovane, A
    Servillo, L
    Balestrieri, C
    Raiola, A
    D'Avino, R
    Tamburrini, M
    Ciardiello, MA
    Camardella, L
    BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2004, 1696 (02): : 245 - 252
  • [9] Recombinant kiwi pectin methylesterase inhibitor: Purification and characterization of the interaction with plant pectin methylesterase during thermal and high-pressure processing
    Mei, Xiaohong
    Shpigelman, Avi
    Verrijssen, Tina A. J.
    Kyomugasho, Clare
    Luo, Yunbo
    Van Loey, Ann M.
    Michiels, Chris
    Huang, Kunlun
    Hendrickx, Marc E.
    INNOVATIVE FOOD SCIENCE & EMERGING TECHNOLOGIES, 2015, 29 : 295 - 301
  • [10] Influence of pH on the Structure and Function of Kiwi Pectin Methylesterase Inhibitor
    Bonavita, Alessandro
    Carratore, Vitale
    Ciardiello, Maria Antonietta
    Giovane, Alfonso
    Servillo, Luigi
    D'Avino, Rossana
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2016, 64 (29) : 5866 - 5876