Species distribution modeling based on the automated identification of citizen observations

被引:29
作者
Botella, Christophe [1 ,2 ,3 ,4 ]
Joly, Alexis [1 ]
Bonnet, Pierre [3 ,5 ]
Monestiez, Pascal [4 ]
Munoz, Francois [6 ]
机构
[1] Inst Natl Rech Informat & Automat INRIA Sophia An, ZENITH Team, Lab Informat Robot & Microelect, Joint Res Unit 5506 CC 477, 161 Rue Ada, F-34095 Montpellier 5, France
[2] INRA, Joint Res Unit, Bot & Modelisat Architecture Plantes & Vegetat, UMR AMAP, F-34398 Montpellier, France
[3] Univ Montpellier, IRD, French Natl Ctr Sci Res, Ctr Cooperat Int Rech Agron Dev CIRAD,AMAP,INRA, Montpellier, France
[4] INRA, BioSP, Site Agroparc, F-84914 Avignon, France
[5] UMR AMAP, CIRAD, F-34398 Montpellier, France
[6] Univ Grenoble Alpes, Lab Ecol Alpine, CS 40700, F-38058 Grenoble, France
来源
APPLICATIONS IN PLANT SCIENCES | 2018年 / 6卷 / 02期
关键词
automated species identification; citizen science; crowdsourcing; deep learning; invasive alien species; species distribution modeling; PLANT-IDENTIFICATION;
D O I
10.1002/aps3.1029
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
PREMISE OF THE STUDY: A species distribution model computed with automatically identified plant observations was developed and evaluated to contribute to future ecological studies. METHODS: We used deep learning techniques to automatically identify opportunistic plant observations made by citizens through a popular mobile application. We compared species distribution modeling of invasive alien plants based on these data to inventories made by experts. RESULTS: The trained models have a reasonable predictive effectiveness for some species, but they are biased by the massive presence of cultivated specimens. DISCUSSION: The method proposed here allows for fine-grained and regular monitoring of some species of interest based on opportunistic observations. More in-depth investigation of the typology of the observations and the sampling bias should help improve the approach in the future.
引用
收藏
页数:11
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