Optimizing surveillance for livestock disease spreading through animal movements

被引:107
作者
Bajardi, Paolo [2 ,3 ]
Barrat, Alain [3 ,4 ]
Savini, Lara [5 ]
Colizza, Vittoria [1 ,6 ]
机构
[1] INSERM, U707, F-75012 Paris, France
[2] Inst Sci Interchange, Computat Epidemiol Lab, Turin, Italy
[3] Aix Marseille Univ, CNRS, UMR 7332, Univ Sud Toulon Var,Ctr Phys Theor, F-13288 Marseille, France
[4] Inst Sci Interchange, Data Sci Lab, Turin, Italy
[5] Ist Zooprofilatt Sperimentale Abruzzo Molise, Teramo, Italy
[6] Univ Paris 06, UPMC, Fac Med Pierre & Marie Curie, UMR S 707, F-75012 Paris, France
基金
欧洲研究理事会;
关键词
modelling; livestock disease; surveillance; dynamic networks; disease prevention and control; livestock movements; MOUTH-DISEASE; NETWORK ANALYSIS; TRADE PATTERNS; CATTLE FARMS; FOOT; EPIDEMIC; DYNAMICS; RISK; IMPACT;
D O I
10.1098/rsif.2012.0289
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The spatial propagation of many livestock infectious diseases critically depends on the animal movements among premises; so the knowledge of movement data may help us to detect, manage and control an outbreak. The identification of robust spreading features of the system is however hampered by the temporal dimension characterizing population interactions through movements. Traditional centrality measures do not provide relevant information as results strongly fluctuate in time and outbreak properties heavily depend on geotemporal initial conditions. By focusing on the case study of cattle displacements in Italy, we aim at characterizing livestock epidemics in terms of robust features useful for planning and control, to deal with temporal fluctuations, sensitivity to initial conditions and missing information during an outbreak. Through spatial disease simulations, we detect spreading paths that are stable across different initial conditions, allowing the clustering of the seeds and reducing the epidemic variability. Paths also allow us to identify premises, called sentinels, having a large probability of being infected and providing critical information on the outbreak origin, as encoded in the clusters. This novel procedure provides a general framework that can be applied to specific diseases, for aiding risk assessment analysis and informing the design of optimal surveillance systems.
引用
收藏
页码:2814 / 2825
页数:12
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