Network quotients: Structural skeletons of complex systems

被引:36
作者
Xiao, Yanghua [1 ]
MacArthur, Ben D. [2 ]
Wang, Hui [3 ]
Xiong, Momiao [4 ,5 ]
Wang, Wei [1 ]
机构
[1] Fudan Univ, Dept Comp & Informat Technol, Shanghai 200433, Peoples R China
[2] Univ Southampton, Sch Math, Southampton SO17 1BJ, Hants, England
[3] Shanghai Univ Sci & Technol, Sch Business, Shanghai 200093, Peoples R China
[4] Fudan Univ, Sch Life Sci, Theoret Syst Biol Lab, Shanghai 200433, Peoples R China
[5] Univ Texas Hlth Sci Ctr Houston, Ctr Human Genet, Houston, TX 77225 USA
基金
中国国家自然科学基金; 英国工程与自然科学研究理事会;
关键词
D O I
10.1103/PhysRevE.78.046102
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
A defining feature of many large empirical networks is their intrinsic complexity. However, many networks also contain a large degree of structural repetition. An immediate question then arises: can we characterize essential network complexity while excluding structural redundancy? In this article we utilize inherent network symmetry to collapse all redundant information from a network, resulting in a coarse graining which we show to carry the essential structural information of the "parent" network. In the context of algebraic combinatorics, this coarse-graining is known as the "quotient." We systematically explore the theoretical properties of network quotients and summarize key statistics of a variety of "real-world" quotients with respect to those of their parent networks. In particular, we find that quotients can be substantially smaller than their parent networks yet typically preserve various key functional properties such as complexity (heterogeneity and hub vertices) and communication (diameter and mean geodesic distance), suggesting that quotients constitute the essential structural skeletons of their parent networks. We summarize with a discussion of potential uses of quotients in analysis of biological regulatory networks and ways in which using quotients can reduce the computational complexity of network algorithms.
引用
收藏
页数:7
相关论文
共 42 条
[1]   Statistical mechanics of complex networks [J].
Albert, R ;
Barabási, AL .
REVIEWS OF MODERN PHYSICS, 2002, 74 (01) :47-97
[2]   Error and attack tolerance of complex networks [J].
Albert, R ;
Jeong, H ;
Barabási, AL .
NATURE, 2000, 406 (6794) :378-382
[3]   Classes of small-world networks [J].
Amaral, LAN ;
Scala, A ;
Barthélémy, M ;
Stanley, HE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (21) :11149-11152
[4]   Size reduction of complex networks preserving modularity [J].
Arenas, A. ;
Duch, J. ;
Fernandez, A. ;
Gomez, S. .
NEW JOURNAL OF PHYSICS, 2007, 9
[5]   Taming complexity [J].
Barabási, AL .
NATURE PHYSICS, 2005, 1 (02) :68-70
[6]   Emergence of scaling in random networks [J].
Barabási, AL ;
Albert, R .
SCIENCE, 1999, 286 (5439) :509-512
[7]   Some analyses of Erdos collaboration graph [J].
Batagelj, V ;
Mrvar, A .
SOCIAL NETWORKS, 2000, 22 (02) :173-186
[8]  
Batagelj V., 1998, Connections, V21, P47
[9]  
Beineke L W., 2004, Topics in Algebraic Graph Theory, V102
[10]  
Biggs N., 1974, ALGEBRAIC GRAPH THEO