Recombinase polymerase amplification: Emergence as a critical molecular technology for rapid, low-resource diagnostics

被引:173
作者
James, Ameh [1 ,2 ]
Macdonald, Joanne [1 ,3 ]
机构
[1] Univ Sunshine Coast, Sch Sci & Engn, Inflammat & Healing Res Cluster, Genecol Res Ctr, Sippy Downs, Qld, Australia
[2] Keystone Labs Int, Fct, Abuja, Nigeria
[3] Columbia Univ, Dept Med, Div Expt Therapeut, New York, NY 10027 USA
关键词
developing countries; isothermal amplification; molecular diagnostics; rapid test; recombinase polymerase amplification; resource constrained setting; MEDIATED ISOTHERMAL AMPLIFICATION; DNA-BINDING-PROPERTIES; REAL-TIME; REVERSE-TRANSCRIPTION; ASSAY; ACID; VIRUS; BACTERIOPHAGE-T4; PROTEIN; QUANTIFICATION;
D O I
10.1586/14737159.2015.1090877
中图分类号
R36 [病理学];
学科分类号
100104 ;
摘要
Isothermal molecular diagnostics are bridging the technology gap between traditional diagnostics and polymerase chain reaction-based methods. These new techniques enable timely and accurate testing, especially in settings where there is a lack of infrastructure to support polymerase chain reaction facilities. Despite this, there is a significant lack of uptake of these technologies in developing countries where they are highly needed. Among these novel isothermal technologies, recombinase polymerase amplification (RPA) holds particular potential for use in developing countries. This rapid nucleic acid amplification approach is fast, highly sensitive and specific, and amenable to countries with a high burden of infectious diseases. Implementation of RPA technology in developing countries is critically required to assess limitations and potentials of the diagnosis of infectious disease, and may help identify impediments that prevent adoption of new molecular technologies in low resource- and low skill settings. This review focuses on approaching diagnosis of infectious disease with RPA.
引用
收藏
页码:1475 / 1489
页数:15
相关论文
共 71 条
[1]  
Abd El Wahed A, 2013, PLOS CURR, V5, pe8364
[2]  
Abd El Wahed A, 2013, PLOS ONE, V8, DOI [10.1371/journal.pone.0071642, 10.1371/currents.outbreaks.62df1c7c75ffc96cd59034531e2e8364]
[3]   Rapid Genome Detection of Schmallenberg Virus and Bovine Viral Diarrhea Virus by Use of Isothermal Amplification Methods and High-Speed Real-Time Reverse Transcriptase PCR [J].
Aebischer, Andrea ;
Wernike, Kerstin ;
Hoffmann, Bernd ;
Beer, Martin .
JOURNAL OF CLINICAL MICROBIOLOGY, 2014, 52 (06) :1883-1892
[4]   Development of a Recombinase Polymerase Amplification Assay for the Detection of Pathogenic Leptospira [J].
Ahmed, Ahmed ;
van der Linden, Hans ;
Hartskeerl, Rudy A. .
INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 2014, 11 (05) :4953-4964
[5]  
Alemayehu S, 2013, MALARIA J, V12, P1475
[6]   A new approach for diagnosis of bovine coronavirus using a reverse transcription recombinase polymerase amplification assay [J].
Amer, H. M. ;
Abd El Wahed, A. ;
Shalaby, M. A. ;
Almajhdi, F. N. ;
Hufert, F. T. ;
Weidmann, M. .
JOURNAL OF VIROLOGICAL METHODS, 2013, 193 (02) :337-340
[7]   Emergence of Zaire Ebola Virus Disease in Guinea [J].
Baize, Sylvain ;
Pannetier, Delphine ;
Oestereich, Lisa ;
Rieger, Toni ;
Koivogui, Lamine ;
Magassouba, N'Faly ;
Soropogui, Barre ;
Sow, Mamadou Saliou ;
Keita, Sakoba ;
De Clerck, Hilde ;
Tiffany, Amanda ;
Dominguez, Gemma ;
Loua, Mathieu ;
Traore, Alexis ;
Kolie, Moussa ;
Malano, Emmanuel Roland ;
Heleze, Emmanuel ;
Bocquin, Anne ;
Mely, Stephane ;
Raoul, Herve ;
Caro, Valerie ;
Cadar, Daniel ;
Gabriel, Martin ;
Pahlmann, Meike ;
Tappe, Dennis ;
Schmidt-Chanasit, Jonas ;
Impouma, Benido ;
Diallo, Abdoul Karim ;
Formenty, Pierre ;
Van Herp, Michel ;
Guenther, Stephan .
NEW ENGLAND JOURNAL OF MEDICINE, 2014, 371 (15) :1418-1425
[8]   Mutations in a conserved motif inhibit single-stranded DNA binding and recombination mediator activities of bacteriophage T4 UvsY protein [J].
Bleuit, JS ;
Ma, YJ ;
Munro, J ;
Morrical, SW .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (07) :6077-6086
[9]   Rapid Detection of HIV-1 Proviral DNA for Early Infant Diagnosis Using Recombinase Polymerase Amplification [J].
Boyle, David S. ;
Lehman, Dara A. ;
Lillis, Lorraine ;
Peterson, Dylan ;
Singhal, Mitra ;
Armes, Niall ;
Parker, Mathew ;
Piepenburg, Olaf ;
Overbaugh, Julie .
MBIO, 2013, 4 (02)
[10]   Diagnostic Devices for Isothermal Nucleic Acid Amplification [J].
Chang, Chia-Chen ;
Chen, Chien-Cheng ;
Wei, Shih-Chung ;
Lu, Hui-Hsin ;
Liang, Yang-Hung ;
Lin, Chii-Wann .
SENSORS, 2012, 12 (06) :8319-8337