Global environmental drivers of influenza

被引:248
作者
Deyle, Ethan R. [1 ]
Maher, M. Cyrus [2 ,3 ]
Hernandez, Ryan D. [4 ]
Basu, Sanjay [5 ]
Sugihara, George [1 ]
机构
[1] Univ Calif San Diego, Scripps Inst Oceanog, La Jolla, CA 92093 USA
[2] Human Longev Inc, Mountain View, CA 94041 USA
[3] Univ Calif San Francisco, Dept Epidemiol & Translat Sci, San Francisco, CA 94158 USA
[4] Univ Calif San Francisco, Dept Bioengn & Therapeut Sci, San Francisco, CA 94158 USA
[5] Stanford Univ, Sch Med, Stanford Prevent Res Ctr, Stanford, CA 94305 USA
基金
美国国家科学基金会;
关键词
epidemiology; empirical dynamic modeling; nonlinear dynamics; state-dependence; physical-biological coupling; TIME-SERIES; RELATIVE-HUMIDITY; VIRUS; SEASONALITY; TRANSMISSION; TEMPERATURE; CAUSALITY; SURVIVAL; CHAOS; ERROR;
D O I
10.1073/pnas.1607747113
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In temperate countries, influenza outbreaks are well correlated to seasonal changes in temperature and absolute humidity. However, tropical countries have much weaker annual climate cycles, and outbreaks show less seasonality and are more difficult to explain with environmental correlations. Here, we use convergent cross mapping, a robust test for causality that does not require correlation, to test alternative hypotheses about the global environmental drivers of influenza outbreaks from country-level epidemic time series. By moving beyond correlation, we show that despite the apparent differences in outbreak patterns between temperate and tropical countries, absolute humidity and, to a lesser extent, temperature drive influenza outbreaks globally. We also find a hypothesized U-shaped relationship between absolute humidity and influenza that is predicted by theory and experiment, but hitherto has not been documented at the population level. The balance between positive and negative effects of absolute humidity appears to be mediated by temperature, and the analysis reveals a key threshold around 75 degrees F. The results indicate a unified explanation for environmental drivers of influenza that applies globally.
引用
收藏
页码:13081 / 13086
页数:6
相关论文
共 26 条
[1]   Tracking and forecasting ecosystem interactions in real time [J].
Deyle, Ethan R. ;
May, Robert M. ;
Munch, Stephan B. ;
Sugihara, George .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2016, 283 (1822)
[2]   Predicting climate effects on Pacific sardine [J].
Deyle, Ethan R. ;
Fogarty, Michael ;
Hsieh, Chih-hao ;
Kaufman, Les ;
MacCall, Alec D. ;
Munch, Stephan B. ;
Perretti, Charles T. ;
Ye, Hao ;
Sugihara, George .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (16) :6430-6435
[3]   Episodic fluctuations in larval supply [J].
Dixon, PA ;
Milicich, MJ ;
Sugihara, G .
SCIENCE, 1999, 283 (5407) :1528-1530
[4]   Dynamical resonance can account for seasonality of influenza epidemics [J].
Dushoff, J ;
Plotkin, JB ;
Levin, SA ;
Earn, DJD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (48) :16915-16916
[5]   Complex dynamics may limit prediction in marine fisheries [J].
Glaser, Sarah M. ;
Fogarty, Michael J. ;
Liu, Hui ;
Altman, Irit ;
Hsieh, Chih-Hao ;
Kaufman, Les ;
MacCall, Alec D. ;
Rosenberg, Andrew A. ;
Ye, Hao ;
Sugihara, George .
FISH AND FISHERIES, 2014, 15 (04) :616-633
[6]   Influenza seasonality: Underlying causes and modeling theories [J].
Lofgren, Eric ;
Fefferman, N. H. ;
Naumov, Y. N. ;
Gorski, J. ;
Naumova, E. N. .
JOURNAL OF VIROLOGY, 2007, 81 (11) :5429-5436
[7]   High temperature (30°C) blocks aerosol but not contact transmission of influenza virus [J].
Lowen, Anice C. ;
Steel, John ;
Mubareka, Samira ;
Palese, Peter .
JOURNAL OF VIROLOGY, 2008, 82 (11) :5650-5652
[8]   Influenza virus transmission is dependent on relative humidity and temperature [J].
Lowen, Anice C. ;
Mubareka, Samira ;
Steel, John ;
Palese, Peter .
PLOS PATHOGENS, 2007, 3 (10) :1470-1476
[9]   The global circulation of seasonal influenza A (H3N2) viruses [J].
Russell, Colin A. ;
Jones, Terry C. ;
Barr, Ian G. ;
Cox, Nancy J. ;
Garten, Rebecca J. ;
Gregory, Vicky ;
Gust, Ian D. ;
Hampson, Alan W. ;
Hay, Alan J. ;
Hurt, Aeron C. ;
de Jong, Jan C. ;
Kelso, Anne ;
Klimov, Alexander I. ;
Kageyama, Tsutomu ;
Komadina, Naomi ;
Lapedes, Alan S. ;
Lin, Yi P. ;
Mosterin, Ana ;
Obuchi, Masatsugu ;
Odagiri, Takato ;
Osterhaus, Albert D. M. E. ;
Rimmelzwaan, Guus F. ;
Shaw, Michael W. ;
Skepner, Eugene ;
Stohr, Klaus ;
Tashiro, Masato ;
Fouchier, Ron A. M. ;
Smith, Derek J. .
SCIENCE, 2008, 320 (5874) :340-346
[10]   SURVIVAL OF AIRBORNE INFLUENZA-VIRUS - EFFECTS OF PROPAGATING HOST, RELATIVE HUMIDITY, AND COMPOSITION OF SPRAY FLUIDS [J].
SCHAFFER, FL ;
SOERGEL, ME ;
STRAUBE, DC .
ARCHIVES OF VIROLOGY, 1976, 51 (04) :263-273