Enzyme-amplified electronic logic gates based on split/intact aptamers

被引:32
作者
Chen, Junhua [1 ]
Zeng, Lingwen [1 ]
机构
[1] Chinese Acad Sci, Guangzhou Inst Biomed & Hlth, South China Inst Stem Cell Biol & Regenerat Med, Key Lab Regenerat Biol, Guangzhou 510530, Guangdong, Peoples R China
关键词
Logic gate; Electronic biosensor; Split/intact aptamer; CONTROLLED BIOFUEL CELLS; GOLD NANOPARTICLES; ELECTROCHEMICAL BIOSENSORS; LIGHT-SCATTERING; SMALL MOLECULES; GRAPHENE OXIDE; BOOLEAN LOGIC; APTASENSORS; OPERATIONS; CIRCUITS;
D O I
10.1016/j.bios.2012.10.030
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
A series of enzyme-amplified electronic logic gates (OR, AND, NOR, and NAND) for one-spot simultaneous monitoring of small molecules and proteins has been constructed at the molecular level. This simple but universal system is based on target-induced self-assembly of split aptamer fragments or target-induced conformational changes of intact aptamers. For the OR and AND logic operations, the split aptamer fragments were used as the molecular recognition components, while for the NOR and NAND logic operations, the intact aptamers were used as the molecular recognition components. Using ATP and thrombin as inputs, the split/intact aptamers as molecular recognition elements, biotin as a tracer, and SA-HR as a reporter molecule, the electronic logic operations can be easily realized by generating amplified current signals as outputs. The logic system is robust and can be applied to human serum samples with excellent selectivity. Importantly, the reversibility of these logic gates makes the electronic system feasible to perform the set-reset function. Our work not only provides a "smart" and flexible logic platform for ATP and thrombin sensing, but also can be expanded for other ligands assay, such as adenosine monophosphate (AMP), theophylline, and cocaine, by rationally splitting their aptamer sequences into two fragments. (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:93 / 99
页数:7
相关论文
共 33 条
  • [1] Colorimetric Logic Gates Based on Supramolecular DNAzyme Structures
    Bi, Sai
    Yan, Yameng
    Hao, Shuangyuan
    Zhang, Shusheng
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2010, 49 (26) : 4438 - 4442
  • [2] An ultrasensitive signal-on electrochemical aptasensor via target-induced conjunction of split aptamer fragments
    Chen, Jinghua
    Zhang, Jing
    Li, Juan
    Yang, Huang-Hao
    Fu, Fengfu
    Chen, Guonan
    [J]. BIOSENSORS & BIOELECTRONICS, 2010, 25 (05) : 996 - 1000
  • [3] Computational Lateral Flow Biosensor for Proteins and Small Molecules: A New Class of Strip Logic Gates
    Chen, Junhua
    Fang, Zhiyuan
    Lie, Puchang
    Zeng, Lingwen
    [J]. ANALYTICAL CHEMISTRY, 2012, 84 (15) : 6321 - 6325
  • [4] Determination of nanograms of proteins based on decreased resonance light scattering of zwitterionic gemini surfactant
    Chen, Zhanguang
    Liu, Guoliang
    Chen, Maohuai
    Peng, Yurui
    Wu, Mingyao
    [J]. ANALYTICAL BIOCHEMISTRY, 2009, 384 (02) : 337 - 342
  • [5] High-fidelity determination of security threats via a Boolean biocatalytic cascade
    Chuang, Min-Chieh
    Windmiller, Joshua Ray
    Santhosh, Padmanabhan
    Ramirez, Gabriela Valdes
    Katz, Evgeny
    Wang, Joseph
    [J]. CHEMICAL COMMUNICATIONS, 2011, 47 (11) : 3087 - 3089
  • [6] Elbaz J, 2010, NAT NANOTECHNOL, V5, P417, DOI [10.1038/nnano.2010.88, 10.1038/NNANO.2010.88]
  • [7] A highly selective and sensitive on-off sensor for silver ions and cysteine by light scattering technique of DNA-functionalized gold nanoparticles
    Feng, Da-Qian
    Liu, Guoliang
    Zheng, Wenjie
    Liu, Jie
    Chen, Tianfeng
    Li, Dan
    [J]. CHEMICAL COMMUNICATIONS, 2011, 47 (30) : 8557 - 8559
  • [8] Multianalyte Digital Enzyme Biosensors with Built-in Boolean Logic
    Katz, Evgeny
    Wang, Joseph
    Privman, Marina
    Halamek, Jan
    [J]. ANALYTICAL CHEMISTRY, 2012, 84 (13) : 5463 - 5469
  • [9] Electronic interfaces switchable by logically processed multiple biochemical and physiological signals
    Katz, Evgeny
    Bocharova, Vera
    Privman, Marina
    [J]. JOURNAL OF MATERIALS CHEMISTRY, 2012, 22 (17) : 8171 - 8178
  • [10] Enzyme-based logic systems for information processing
    Katz, Evgeny
    Privman, Vladimir
    [J]. CHEMICAL SOCIETY REVIEWS, 2010, 39 (05) : 1835 - 1857