Cleavage and protection of locked nucleic acid-modified DNA by restriction endonucleases

被引:9
作者
Crouzier, Lucile [1 ,2 ]
Dubois, Camille [1 ,2 ]
Wengel, Jesper [3 ]
Veedu, Rakesh N. [1 ]
机构
[1] Univ Queensland, Sch Chem & Mol Biosci, Brisbane, Qld 4072, Australia
[2] Inst Polytech LaSalle Beauvais, F-60026 Beauvais, France
[3] Univ So Denmark, Dept Phys Chem & Pharm, Nucle Acid Ctr, DK-5230 Odense M, Denmark
基金
欧洲研究理事会;
关键词
Modified nucleic acids; Locked nucleic acids; Oligonucleotides; PHOTO-CROSS-LINKING; ENDODEOXYRIBONUCLEASE ECORI; RECOGNITION; ANALOGS; OLIGODEOXYNUCLEOTIDES; DUPLEXES; TAQI; LNA; METHYLTRANSFERASE; OLIGONUCLEOTIDES;
D O I
10.1016/j.bmcl.2012.05.113
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Locked nucleic acid (LNA) is one of the most prominent nucleic acid analogues reported so far. We herein for the first time report cleavage by restriction endonuclease of LNA-modified DNA oligonucleotides. The experiments revealed that RsaI is an efficient enzyme capable of recognizing and cleaving LNA-modified DNA oligonucleotides. Furthermore, introduction of LNA nucleotides protects against cleavage by the restriction endonucleases PvuII, PstI, SacI, KpnI and EcoRI. (C) 2012 Elsevier Ltd. All rights reserved.
引用
收藏
页码:4836 / 4838
页数:3
相关论文
共 33 条
[1]   Iodouracil-mediated photocrosslinking of DNA to EcoRII restriction endonuclease in catalytic conditions [J].
Babkina, OV ;
Chutko, CA ;
Shashkov, AA ;
Dzhidzhoev, MS ;
Eritja, R ;
Gromova, ES .
PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES, 2002, 1 (09) :636-640
[2]  
BERKNER KL, 1977, J BIOL CHEM, V252, P3185
[3]  
BODNAR JW, 1983, J BIOL CHEM, V258, P5206
[4]   NMR studies of restriction enzyme-DNA interactions: Role of conformation in sequence specificity [J].
Dupureur, CM .
BIOCHEMISTRY, 2005, 44 (13) :5065-5074
[5]   ANALYSIS OF THE RECOGNITION MECHANISM INVOLVED IN THE ECORV CATALYZED CLEAVAGE OF DNA USING MODIFIED OLIGODEOXYNUCLEOTIDES [J].
FLIESS, A ;
WOLFES, H ;
SEELA, F ;
PINGOUD, A .
NUCLEIC ACIDS RESEARCH, 1988, 16 (24) :11781-11793
[6]   Catalytic mechanisms of restriction and homing endonucleases [J].
Galburt, EA ;
Stoddard, BL .
BIOCHEMISTRY, 2002, 41 (47) :13851-13860
[7]   Locked nucleic acid: A potent nucleic acid analog in therapeutics and biotechnology [J].
Jepsen, JS ;
Sorensen, MD ;
Wengel, J .
OLIGONUCLEOTIDES, 2004, 14 (02) :130-146
[8]   OLIGONUCLEOTIDE DUPLEXES CONTAINING INOSINE, 7-DEAZAINOSINE, TUBERCIDIN, NEBULARINE AND 7-DEAZANEBULARINE AS SUBSTRATES FOR RESTRICTION ENDONUCLEASES HINDII, SALI AND TAQI [J].
JIRICNY, J ;
WOOD, SG ;
MARTIN, D ;
UBASAWA, A .
NUCLEIC ACIDS RESEARCH, 1986, 14 (16) :6579-6590
[9]   Transient and Switchable (Triethylsilyl)ethynyl Protection of DNA against Cleavage by Restriction Endonucleases [J].
Kielkowski, Pavel ;
Macickova-Cahova, Hana ;
Pohl, Radek ;
Hocek, Michal .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2011, 50 (37) :8727-8730
[10]   PURINE 8-SUBSTITUTION MODULATES THE RECOGNITION BY RESTRICTION ENDODEOXYRIBONUCLEASE ECORI OF OCTADEOXYRIBONUCLEOTIDES (DGGAATTCC) [J].
KOMATSU, H ;
KIM, SG ;
SAKABE, I ;
ICHIKAWA, T ;
NAKAI, M ;
TAKAKU, H .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 1992, 2 (06) :565-570