Competitive Allele-Specific Hairpin Primer PCR for Extremely High Allele Discrimination in Typing of Single Nucleotide Polymorphisms

被引：12
作者：
Takei, Fumie [1 ]
Igarashi, Masako [1 ]
Oka, Yoshimi [2 ]
Koga, Yusuke [2 ]
Nakatani, Kazuhiko [1 ]
机构：
[1] Osaka Univ, Inst Sci & Ind Res, Ibaraki, Osaka 5670047, Japan
[2] Osaka Univ, Career Design Lab Women, Suita, Osaka 5650871, Japan
来源：
CHEMBIOCHEM | 2012年 / 13卷 / 10期
关键词：
allele-specific PCR; competitor primers; hairpin primers; SNP typing; POLYMERASE-CHAIN REACTIONS; DNA-TAGGED PCR; SECONDARY-STRUCTURE; GENOMIC DNA; AMPLIFICATION; PROBES; SNP; MUTATIONS; MISMATCH; SAMPLES;
D O I：
10.1002/cbic.201200266
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
[No abstract available]
引用
收藏
页码：1409 / 1412
页数：4
相关论文
共 50 条
  • [21] ALLELE-SPECIFIC REAL-TIME PCR FOR QUANTIFICATION AND DISCRIMINATION OF STEROL 14 α-DEMETHYLATION-INHIBITOR-RESISTANT GENOTYPES OF MYCOSPHAERELLA GRAMINICOLA
    Selim, S.
    JOURNAL OF PLANT PATHOLOGY, 2009, 91 (02) : 391 - 400
  • [22] Allele-specific polymerase chain reaction for the detection of Alzheimer's disease-related single nucleotide polymorphisms
    Darawi, Mohd Nazif
    Ai-Vyrn, Chin
    Ramasamy, Kalavathy
    Hua, Philip Poi Jun
    Pin, Tan Maw
    Kamaruzzaman, Shahrul Bahyah
    Majeed, Abu Bakar Abdul
    BMC MEDICAL GENETICS, 2013, 14
  • [23] Colorimetric SNP Genotyping Based on Allele-Specific PCR by Using a Thiol-Labeled Primer
    Jung, Ye Lim
    Jung, Cheulhee
    Parab, Harshala
    Cho, Dae-Yeon
    Park, Hyun Gyu
    CHEMBIOCHEM, 2011, 12 (09) : 1387 - 1390
  • [24] Individual single tube genotyping and DNA pooling by allele-specific PCR to uncover associations of polymorphisms with complex diseases
    Casado-Diaz, Antonio
    Cuenca-Acevedo, Rafael
    Quesada, Jose Manuel
    Dorado, Gabriel
    CLINICA CHIMICA ACTA, 2007, 376 (1-2) : 155 - 162
  • [25] Designing Allele-Specific Competitive-Extension PCR-Based Assays for High-Throughput Genotyping and Gene Characterization
    Kalendar, Ruslan
    Shustov, Alexandr V.
    Akhmetollayev, Ilyas
    Kairov, Ulykbek
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 9
  • [26] Mining Listeria monocytogenes single nucleotide polymorphism sites to identify the major serotypes using allele-specific multiplex PCR
    Zhang, Xu
    Ling, Li
    Li, Zhiyong
    Wang, Jufang
    INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 2020, 335
  • [27] Development of a multiplex allele-specific PCR assay for rapid screening of Lactoferrin TATA box polymorphisms
    Valadan R.
    Sharifiyazdi H.
    Mirzaei A.
    Hedayatian K.
    Comparative Clinical Pathology, 2013, 22 (6) : 1241 - 1244
  • [28] Dual-allele dipstick assay for genotyping single nucleotide polymorphisms by primer extension reaction
    Konstantou, Jessica K.
    Ioannou, Penelope C.
    Christopoulos, Theodore K.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2009, 17 (01) : 105 - 111
  • [29] Allele-specific qRT-PCR demonstrates superior detection of single nucleotide polymorphisms as genetic markers for West Nile virus compared to Luminex® and quantitative sequencing
    Worwa, Gabriella
    Andrade, Christy C.
    Thiemann, Tara C.
    Park, Bborie
    Maharaj, Payal D.
    Anishchenko, Michael
    Brault, Aaron C.
    Reisen, William K.
    JOURNAL OF VIROLOGICAL METHODS, 2014, 195 : 76 - 85
  • [30] Rapid carrier screening for β-thalassemia by single-step allele-specific PCR and detection
    Quek, Dollyn Liying
    Ng, Yen-Yek
    Wang, Wen
    Tan, Arnold S. C.
    Tang-Lim, Guek-Im
    Ng, Ivy S. L.
    Law, Hai-Yang
    Chong, Samuel S.
    CLINICAL BIOCHEMISTRY, 2007, 40 (5-6) : 427 - 430
12345