Genome-wide identification and expression profiling of dehydrin gene family in Malus domestica

被引:61
|
作者
Liang, Dong [1 ]
Xia, Hui [1 ]
Wu, Shan [1 ]
Ma, Fengwang [1 ]
机构
[1] NW A&F Univ, Coll Hort, State Key Lab Crop Stress Biol Arid Areas, Yangling 712100, Shaanxi, Peoples R China
关键词
Abiotic stress; Apple; Dehydrin; Gene family; LOW-TEMPERATURE; DEHYDRATION TOLERANCE; COLD-ACCLIMATION; OSMOTIC-STRESS; DROUGHT STRESS; LEA PROTEINS; SALT; BARLEY; LOCALIZATION; ABUNDANT;
D O I
10.1007/s11033-012-1968-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The family of dehydrin genes has important roles in protecting higher plants against abiotic stress, such as drought, salinity and cold. However, knowledge about apple dehydrin gene family is limited. In the present study, we used a bioinformatics approach to identify members of that family in apple (Malus domestica). A total of 12 apple dehydrin genes (MdDHNs) were identified and located on various chromosomes. All putative proteins from those genes contained a typical K domain. Among 12 MdDHNs, nine were cloned and their expression patterns were investigated. Expression profiling indicated that the these nine dehydrin genes display differential expression patterns in various tissues. Moreover, transcript levels of some MdDHNs were up-regulated significantly under drought, low temperature, or ABA treatment, which indicated their important roles during stress adaptation. These results demonstrate that the apple dehydrin gene family may function in tissue development and plant stress responses.
引用
收藏
页码:10759 / 10768
页数:10
相关论文
共 50 条
  • [41] Genome-wide identification and expression analysis of major latex protein (MLP) family genes in the apple (Malus domestica Borkh.) genome
    Yuan, Gaopeng
    He, Shanshan
    Bian, Shuxun
    Han, Xiaolei
    Liu, Kai
    Cong, Peihua
    Zhang, Caixia
    GENE, 2020, 733
  • [42] Genome-wide identification and characterization of the apple (Malus domestica) HECT ubiquitin-protein ligase family and expression analysis of their responsiveness to abiotic stresses
    Jianing Xu
    Shanshan Xing
    Haoran Cui
    Xuesen Chen
    Xiaoyun Wang
    Molecular Genetics and Genomics, 2016, 291 : 635 - 646
  • [43] Identification and expression of the CEP gene family in apple (Malus×domestica)
    LI Rui
    AN Jian-ping
    YOU Chun-xiang
    SHU Jing
    WANG Xiao-fei
    HAO Yu-jin
    Journal of Integrative Agriculture, 2018, 17 (02) : 348 - 358
  • [44] Genome-wide Identification, Expression, and Functional Analysis of MdMSI Genes in Apples (Malus domestica Borkh.)
    Wang, Daru
    Wang, Xun
    Zhang, Chunling
    Yang, Kuo
    Wang, Xinjie
    Cui, Jianying
    Liu, Dandan
    You, Chunxiang
    FRONTIERS IN GENETICS, 2022, 13
  • [45] Genome-wide identification and expression profiling of HD-ZIP gene family in Medicago truncatula
    Li, Zhe
    Gao, Zhengquan
    Li, Ruihua
    Xu, Yan
    Kong, Yingzhen
    Zhou, Gongke
    Meng, Chunxiao
    Hu, Ruibo
    GENOMICS, 2020, 112 (05) : 3624 - 3635
  • [46] Genome-wide identification and expression profiling of the SPL family genes in wheat
    Guo, Fuye
    Lu, Qiuwei
    Cang, Jing
    BOTANY, 2021, 99 (04) : 185 - 198
  • [47] Genome-wide identification, evolution, and expression analysis of GATA transcription factors in apple (Malus x domestica Borkh.)
    Chen, Hongfei
    Shao, Hongxia
    Li, Ke
    Zhang, Dong
    Fan, Sheng
    Li, Youmei
    Han, Mingyu
    GENE, 2017, 627 : 460 - 472
  • [48] Genome-wide identification, classification and expression profiling of nicotianamine synthase (NAS) gene family in maize
    Zhou, Xiaojin
    Li, Suzhen
    Zhao, Qianqian
    Liu, Xiaoqing
    Zhang, Shaojun
    Sun, Cheng
    Fan, Yunliu
    Zhang, Chunyi
    Chen, Rumei
    BMC GENOMICS, 2013, 14
  • [49] Genome-wide identification, classification and expression profiling of nicotianamine synthase (NAS) gene family in maize
    Xiaojin Zhou
    Suzhen Li
    Qianqian Zhao
    Xiaoqing Liu
    Shaojun Zhang
    Cheng Sun
    Yunliu Fan
    Chunyi Zhang
    Rumei Chen
    BMC Genomics, 14
  • [50] Genome-wide identification, structure characterization, and expression pattern profiling of aquaporin gene family in cucumber
    Zhu, Yong-Xing
    Yang, Lei
    Liu, Ning
    Yang, Jie
    Zhou, Xiao-Kang
    Xia, Yu-Chen
    He, Yang
    He, Yi-Qin
    Gong, Hai-Jun
    Ma, Dong-Fang
    Yin, Jun-Liang
    BMC PLANT BIOLOGY, 2019, 19 (01)