A multicenter study on radiomic features from T2-weighted images of a customized MR pelvic phantom setting the basis for robust radiomic models in clinics

被引:27
作者
Bianchini, Linda [1 ,2 ]
Santinha, Joao [3 ,4 ]
Loucao, Nuno [5 ]
Figueiredo, Mario [4 ]
Botta, Francesca [6 ]
Origgi, Daniela [6 ]
Cremonesi, Marta [7 ]
Cassano, Enrico [8 ]
Papanikolaou, Nikolaos [3 ]
Lascialfari, Alessandro [9 ,10 ]
机构
[1] Univ Milan, Dept Phys, Via Celoria 16, I-20133 Milan, Italy
[2] INSTM RU, Via Celoria 16, I-20133 Milan, Italy
[3] Champalimaud Fdn, Ctr Unknown CCU, Computat Clin Imaging Grp, Lisbon, Portugal
[4] Univ Lisbon, Inst Telecomunicacoes, Inst Super Tecn, Lisbon, Portugal
[5] Philips Healthcare, Lisbon, Portugal
[6] European Inst Oncol IRCSS, Med Phys Unit, IEO, Milan, Italy
[7] European Inst Oncol IRCSS, Radiat Res Unit, IEO, Milan, Italy
[8] European Inst Oncol IRCSS, Breast Imaging Div, IEO, Milan, Italy
[9] Univ Pavia, Dept Phys, Pavia, Italy
[10] INSTM RU, Pavia, Italy
关键词
radiomic phantom; radiomics; repeatability; reproducibility; robustness; T-2-weighted magnetic resonance imaging; QUANTITATIVE IMAGING BIOMARKERS; STATISTICAL-METHODS; ACQUISITION; SIZE;
D O I
10.1002/mrm.28521
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Purpose To investigate the repeatability and reproducibility of radiomic features extracted from MR images and provide a workflow to identify robust features. Methods T-2-weighted images of a pelvic phantom were acquired on three scanners of two manufacturers and two magnetic field strengths. The repeatability and reproducibility of features were assessed by the intraclass correlation coefficient and the concordance correlation coefficient, respectively, and by the within-subject coefficient of variation, considering repeated acquisitions with and without phantom repositioning, and with different scanner and acquisition parameters. The features showing intraclass correlation coefficient or concordance correlation coefficient >0.9 were selected, and their dependence on shape information (Spearman's rho > 0.8) analyzed. They were classified for their ability to distinguish textures, after shuffling voxel intensities of images. Results From 944 two-dimensional features, 79.9% to 96.4% showed excellent repeatability in fixed position across all scanners. A much lower range (11.2% to 85.4%) was obtained after phantom repositioning. Three-dimensional extraction did not improve repeatability performance. Excellent reproducibility between scanners was observed in 4.6% to 15.6% of the features, at fixed imaging parameters. In addition, 82.4% to 94.9% of the features showed excellent agreement when extracted from images acquired with echo times 5 ms apart, but decreased with increasing echo-time intervals, and 90.7% of the features exhibited excellent reproducibility for changes in pulse repetition time. Of nonshape features, 2.0% was identified as providing only shape information. Conclusion We showed that radiomic features are affected by MRI protocols and propose a general workflow to identify repeatable, reproducible, and informative radiomic features to ensure robustness of clinical studies.
引用
收藏
页码:1713 / 1726
页数:14
相关论文
共 43 条
[31]  
Schwarze M, 2019, SCI REP-UK, V9, DOI [10.1038/s41598-019-46880-8, 10.1038/s41598-019-45766-z]
[32]   Evaluation of the solitary pulmonary nodule: size matters, but do not ignore the power of morphology [J].
Snoeckx, Annemie ;
Reyntiens, Pieter ;
Desbuquoit, Damien ;
Spinhoven, Maarten J. ;
Van Schil, Paul E. ;
van Meerbeeck, Jan P. ;
Parizel, Paul M. .
INSIGHTS INTO IMAGING, 2018, 9 (01) :73-86
[33]   Metrology Standards for Quantitative Imaging Biomarkers [J].
Sullivan, Daniel C. ;
Obuchowski, Nancy A. ;
Kessler, Larry G. ;
Raunig, David L. ;
Gatsonis, Constantine ;
Huang, Erich P. ;
Kondratovich, Marina ;
McShane, Lisa M. ;
Reeves, Anthony P. ;
Barboriak, Daniel P. ;
Guimaraes, Alexander R. ;
Wahl, Richard L. .
RADIOLOGY, 2015, 277 (03) :813-825
[34]   Multiparametric MRI and radiomics in prostate cancer: a review [J].
Sun, Yu ;
Reynolds, Hayley M. ;
Parameswaran, Bimal ;
Wraith, Darren ;
Finnegan, Mary E. ;
Williams, Scott ;
Haworth, Annette .
AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE, 2019, 42 (01) :3-25
[35]   Intratumor Heterogeneity Characterized by Textural Features on Baseline 18F-FDG PET Images Predicts Response to Concomitant Radiochemotherapy in Esophageal Cancer [J].
Tixier, Florent ;
Le Rest, Catherine Cheze ;
Hatt, Mathieu ;
Albarghach, Nidal ;
Pradier, Olivier ;
Metges, Jean-Philippe ;
Corcos, Laurent ;
Visvikis, Dimitris .
JOURNAL OF NUCLEAR MEDICINE, 2011, 52 (03) :369-378
[36]   Repeatability and Reproducibility of Radiomic Features: A Systematic Review [J].
Traverso, Alberto ;
Wee, Leonard ;
Dekker, Andre ;
Gillies, Robert .
INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 2018, 102 (04) :1143-1158
[37]   Computational Radiomics System to Decode the Radiographic Phenotype [J].
van Griethuysen, Joost J. M. ;
Fedorov, Andriy ;
Parmar, Chintan ;
Hosny, Ahmed ;
Aucoin, Nicole ;
Narayan, Vivek ;
Beets-Tan, Regina G. H. ;
Fillion-Robin, Jean-Christophe ;
Pieper, Steve ;
Aerts, Hugo J. W. L. .
CANCER RESEARCH, 2017, 77 (21) :E104-E107
[38]   Reliability of CT-based texture features: Phantom study [J].
Varghese, Bino A. ;
Hwang, Darryl ;
Cen, Steven Y. ;
Levy, Joshua ;
Liu, Derek ;
Lau, Christopher ;
Rivas, Marielena ;
Desai, Bhushan ;
Goodenough, David J. ;
Duddalwar, Vinay A. .
JOURNAL OF APPLIED CLINICAL MEDICAL PHYSICS, 2019, 20 (08) :155-163
[39]   Vulnerabilities of radiomic signature development: The need for safeguards [J].
Welch, Mattea L. ;
McIntosh, Chris ;
Haibe-Kains, Benjamin ;
Milosevic, Michael F. ;
Wee, Leonard ;
Dekker, Andre ;
Huang, Shao Hui ;
Purdie, Thomas G. ;
O'Sullivan, Brian ;
Aerts, Hugo J. W. L. ;
Jaffray, David A. .
RADIOTHERAPY AND ONCOLOGY, 2019, 130 :2-9
[40]   Evaluation of radiomic texture feature error due to MRI acquisition and reconstruction: A simulation study utilizing ground truth [J].
Yang, Fei ;
Dogan, Nesrin ;
Stoyanova, Radka ;
Ford, John Chetley .
PHYSICA MEDICA-EUROPEAN JOURNAL OF MEDICAL PHYSICS, 2018, 50 :26-36