Resistive-Pulse Nanopore Sensing of Ligand Exchange at the Single Nanocluster Limit for Peptide Detection

被引:9
作者
Cox, Bobby D. [1 ]
Ghimire, Madhav L. [1 ]
Bertino, Massimo F. [1 ]
Reiner, Joseph E. [1 ]
机构
[1] Virginia Commonwealth Univ, Dept Phys, Richmond, VA 23284 USA
基金
美国国家科学基金会;
关键词
nanoclusters; nanopore; peptide; ligand exchange; glutathione; STOCHASTIC DETECTION; GOLD NANOPARTICLES; ALPHA-HEMOLYSIN; SMALL MOLECULES; SURFACE; AU-38(SR)(24); SPECTROMETRY;
D O I
10.1021/acsanm.0c01451
中图分类号
TB3 [工程材料学];
学科分类号
0805 ; 080502 ;
摘要
Water-soluble metallic nanoclusters require passivating ligands to stabilize and, in many cases, derivatize their surfaces. Recently, we demonstrated the use of resistive-pulse nanopore sensing to observe ligand-induced structural fluctuations of individually trapped nanoclusters. Here we expand on this capability by observing real-time ligand exchange at the single cluster limit. The nanopore technique allows time-resolved observations of ligand exchange and ligand addition with exchange times that agree with calculated free energy profiles. The observed kinetics for thiolated poly(ethylene glycol) (S-PEG) ligands exchanging with tiopronin and glutathione-capped gold clusters is on the order of seconds within the nanoconfined region of the pore, and this rapid exchange motivates the development of a new peptide sensor. We also show proof of concept that nanopore-based exchange between a peptide tiopronin-capped gold cluster leads to current fluctuations that enable identification of the peptide.
引用
收藏
页码:7973 / 7981
页数:9
相关论文
共 56 条
[1]   DNA sequencing by nanopores: advances and challenges [J].
Agah, Shaghayegh ;
Zheng, Ming ;
Pasquali, Matteo ;
Kolomeisky, Anatoly B. .
JOURNAL OF PHYSICS D-APPLIED PHYSICS, 2016, 49 (41)
[2]   Structure-informed detection and quantification of peptides in food and biological fluids [J].
Agyei, Dominic ;
Pan, Sharadwata ;
Acquah, Caleb ;
Bekhit, Alaa El-Din Ahmed ;
Danquah, Michael K. .
JOURNAL OF FOOD BIOCHEMISTRY, 2019, 43 (01)
[3]   Infrared Laser Heating Applied to Nanopore Sensing for DNA Duplex Analysis [J].
Angevine, Christopher E. ;
Seashols-Williams, Sarah J. ;
Reiner, Joseph E. .
ANALYTICAL CHEMISTRY, 2016, 88 (05) :2645-2651
[4]   Enhanced Single Molecule Mass Spectrometry via Charged Metallic Clusters [J].
Angevine, Christopher E. ;
Chavis, Amy E. ;
Kothalawala, Nuwan ;
Dass, Amala ;
Reiner, Joseph E. .
ANALYTICAL CHEMISTRY, 2014, 86 (22) :11077-11085
[5]   Effect of Postsynthesis Purifications on Gold and Silver Nanoparticle Ligand Coverage [J].
Ansar, Siyam M. ;
Mohammed, Fiaz S. ;
von White, Gregory, II ;
Budi, Maeve ;
Powell, Kristin Conrad ;
Mefford, O. Thompson ;
Kitchens, Christopher L. .
JOURNAL OF PHYSICAL CHEMISTRY C, 2016, 120 (12) :6842-6850
[6]   Lipid bilayer membrane technologies: A review on single-molecule studies of DNA sequencing by using membrane nanopores [J].
Bello, Julian ;
Kim, Young-Rok ;
Kim, Sun Min ;
Jeon, Tae-Joon ;
Shim, Jiwook .
MICROCHIMICA ACTA, 2017, 184 (07) :1883-1897
[7]   Facile syntheses of monodisperse ultrasmall Au clusters [J].
Bertino, Massimo F. ;
Sun, Zhong-Ming ;
Zhang, Rui ;
Wang, Lai-Sheng .
JOURNAL OF PHYSICAL CHEMISTRY B, 2006, 110 (43) :21416-21418
[8]   CancerPDF: A repository of cancer-associated peptidome found in human biofluids [J].
Bhalla, Sherry ;
Verma, Ruchi ;
Kaur, Harpreet ;
Kumar, Rajesh ;
Usmani, Salman Sadullah ;
Sharma, Suresh ;
Raghava, Gajendra P. S. .
SCIENTIFIC REPORTS, 2017, 7
[9]   Rectification of the Current in α-Hemolysin Pore Depends on the Cation Type: The Alkali Series Probed by Molecular Dynamics Simulations and Experiments [J].
Bhattacharya, Swati ;
Muzard, Julien ;
Payet, Linda ;
Mathe, Jerome ;
Bockelmann, Ulrich ;
Aksimentiev, Aleksei ;
Viasnoff, Virgile .
JOURNAL OF PHYSICAL CHEMISTRY C, 2011, 115 (10) :4255-4264
[10]  
Boles MA, 2016, NAT MATER, V15, P141, DOI [10.1038/nmat4526, 10.1038/NMAT4526]