PDBe: Protein Data Bank in Europe

被引：107

作者：

Gutmanas, Aleksandras ^{[1
]}

Alhroub, Younes ^{[1
]}

Battle, Gary M. ^{[1
]}

Berrisford, John M. ^{[1
]}

Bochet, Estelle ^{[1
]}

Conroy, Matthew J. ^{[1
]}

Dana, Jose M. ^{[1
]}

Montecelo, Manuel A. Fernandez ^{[1
]}

van Ginkel, Glen ^{[1
]}

Gore, Swanand P. ^{[1
]}

Haslam, Pauline ^{[1
]}

Hendrickx, Pieter M. S. ^{[1
]}

Hirshberg, Miriam ^{[1
]}

Lagerstedt, Ingvar ^{[1
]}

Mir, Saqib ^{[1
]}

Mukhopadhyay, Abhik ^{[1
]}

Oldfield, Thomas J. ^{[1
]}

Patwardhan, Ardan ^{[1
]}

Rinaldi, Luana ^{[1
]}

Sahni, Gaurav ^{[1
]}

Sanz-Garcia, Eduardo ^{[1
]}

Sen, Sanchayita ^{[1
]}

Slowley, Robert A. ^{[1
]}

Velankar, Sameer ^{[1
]}

Wainwright, Michael E. ^{[1
]}

Kleywegt, Gerard J. ^{[1
]}

机构：

[1] European Mol Biol Lab, European Bioinformat Inst, Prot Data Bank Europe, Cambridge CB10 1SD, England

来源：

NUCLEIC ACIDS RESEARCH | 2014年 / 42卷 / D1期

基金：

英国生物技术与生命科学研究理事会; 英国惠康基金; 美国国家卫生研究院;

关键词：

VISUALIZATION; VALIDATION; RESOURCES; TAXONOMY; ARCHIVE; WWPDB;

D O I：

10.1093/nar/gkt1180

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The Protein Data Bank in Europe (pdbe.org) is a founding member of the Worldwide PDB consortium (wwPDB; wwpdb.org) and as such is actively engaged in the deposition, annotation, remediation and dissemination of macromolecular structure data through the single global archive for such data, the PDB. Similarly, PDBe is a member of the EMDataBank organisation (emdatabank.org), which manages the EMDB archive for electron microscopy data. PDBe also develops tools that help the biomedical science community to make effective use of the data in the PDB and EMDB for their research. Here we describe new or improved services, including updated SIFTS mappings to other bioinformatics resources, a new browser for the PDB archive based on Gene Ontology (GO) annotation, updates to the analysis of Nuclear Magnetic Resonance-derived structures, redesigned search and browse interfaces, and new or updated visualisation and validation tools for EMDB entries.

引用

页码：D285 / D291

页数：7

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