The physico-chemical mechanism of the tautomerisation via the DPT of the long Hyp*•Hyp Watson-Crick base pair containing rare tautomer: A QM and QTAIM detailed look

被引:47
作者
Brovarets, Ol'ha O. [1 ,2 ,3 ]
Zhurakivsky, Roman O. [1 ,2 ]
Hovorun, Dmytro M. [1 ,2 ,3 ]
机构
[1] Natl Acad Sci Ukraine, Dept Mol & Quantum Biophys, Inst Mol Biol & Genet, UA-03680 Kiev, Ukraine
[2] State Key Lab Mol & Cell Biol, Res & Educ Ctr, UA-03680 Kiev, Ukraine
[3] Taras Shevchenko Natl Univ Kyiv, Inst High Technol, Dept Mol Biol Biotechnol & Biophys, UA-03022 Kiev, Ukraine
关键词
HARTREE-FOCK; HYPOXANTHINE; INOSINE; DERIVATIVES; STABILITY; BARRIERS; ENERGY; ATOMS; SET; DFT;
D O I
10.1016/j.cplett.2013.05.067
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We showed that biologically important planar Hyp*center dot Hyp base pair (C-s) formed by the enol and keto tautomers of the hypoxanthine tautomerises via the synchronous concerted mechanism through the TS (C-2v). The five key points were detected and completely investigated along the IRC of the Hyp*center dot Hyp <-> Hyp center dot Hyp* tautomerisation via the DPT. It was found that intermolecular antiparallel O6H center dot center dot center dot O6 and N1H center dot center dot center dot N1 H-bonds are cooperative and mutually reinforce each other. It was proved that the Hyp*center dot Hyp/Hyp center dot Hyp* base pair is dynamically stable structure with a lifetime 8.2 x 10(-12) s and all its six low-frequency intermolecular vibrations are able to develop during this period of time. (C) 2013 Elsevier B. V. All rights reserved.
引用
收藏
页码:126 / 132
页数:7
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