Topological defects, surface geometry and cohesive energy of twisted filament bundles

被引:29
作者
Bruss, Isaac R. [1 ]
Grason, Gregory M. [1 ]
机构
[1] Univ Massachusetts, Dept Polymer Sci & Engn, Conte Res Ctr, Amherst, MA 01003 USA
基金
美国国家科学基金会;
关键词
DNA; FIBERS; SIZE; CURVATURE; COLLAGEN; ANCIENT; FORCES; ORDER;
D O I
10.1039/c3sm50672j
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Cohesive assemblies of filaments are a common structural motif found in diverse contexts, ranging from biological materials such as fibrous proteins, to artificial materials such as carbon nanotube ropes and micropatterned filament arrays. In this paper, we analyze the complex dependence of cohesive energy on twist, a key structural parameter of both self-assembled and fabricated filament bundles. Based on the analysis of simulated ground states of cohesive bundles, we show that the non-linear influence of twist derives from two distinct geometric features of twisted bundles: (i) the geometrical frustration of inter-filament packing in the bundle cross-section; and (ii) the evolution of the surface geometry of bundles with twist, which dictates the cohesive cost of non-contacting filaments at the surface. Packing frustration in the bundle core gives rise to the appearance of a universal sequence of topological defects, excess 5-fold disclinations, with increasing twist, while the evolution of filament contact at the surface of the bundle generically favors twisted geometries for sufficiently long filaments. Our analysis of both continuum and discrete models of filament bundles shows that, even in the absence of external torque or intrinsic chirality, cohesive energy universally favors twisted ground states above a critical (length/radius) aspect ratio and below a critical filament stiffness threshold.
引用
收藏
页码:8327 / 8345
页数:19
相关论文
共 54 条
[31]   Structure and interactions of biological helices [J].
Kornyshev, Alexei A. ;
Lee, Dominic J. ;
Leikin, Sergey ;
Wynveen, Aaron .
REVIEWS OF MODERN PHYSICS, 2007, 79 (03) :943-996
[32]   30,000-Year-Old Wild Flax Fibers [J].
Kvavadze, Eliso ;
Bar-Yosef, Ofer ;
Belfer-Cohen, Anna ;
Boaretto, Elisabetta ;
Jakeli, Nino ;
Matskevich, Zinovi ;
Meshveliani, Tengiz .
SCIENCE, 2009, 325 (5946) :1359-1359
[33]   Protein-DNA Interactions Determine the Shapes of DNA Toroids Condensed in Virus Capsids [J].
Leforestier, Amelie ;
Siber, Antonio ;
Livolant, Francoise ;
Podgornik, Rudolf .
BIOPHYSICAL JOURNAL, 2011, 100 (09) :2209-2216
[34]   Structure of toroidal DNA collapsed inside the phage capsid [J].
Leforestier, Amelie ;
Livolant, Francoise .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (23) :9157-9162
[35]   Size dependent intrinsic bulk twisting of carbon nanotube ropes [J].
Liang, HY ;
Upmanyu, M .
CARBON, 2005, 43 (15) :3189-3194
[36]  
Maugis D., 2000, Contact, Adhesion and Rupture of Elastic Solids
[37]   DNA bundle formation induced by cationic surfactants [J].
McLoughlin, D ;
Delsanti, M ;
Tribet, C ;
Langevin, D .
EUROPHYSICS LETTERS, 2005, 69 (03) :461-467
[38]   Self-equilibrium configurations of composite strands [J].
Morimoto, Takuya ;
Iizuka, Hiroshi .
COMPOSITE STRUCTURES, 2012, 94 (05) :1575-1581
[39]   19,000-YEAR-OLD TWISTED FIBERS FROM OHALO-II [J].
NADEL, D ;
DANIN, A ;
WERKER, E ;
SCHICK, T ;
KISLEV, ME ;
STEWART, K .
CURRENT ANTHROPOLOGY, 1994, 35 (04) :451-457
[40]  
Nelson D. R., 2002, Defects and Geometry in Condensed Matter Physics