kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome

被引:453
作者
Gardner, Shea N. [1 ]
Slezak, Tom [1 ]
Hall, Barry G. [2 ]
机构
[1] Lawrence Livermore Natl Lab, Computat Global Secur, Livermore, CA 94550 USA
[2] Bellingham Res Inst, Bellingham, WA 98229 USA
关键词
STRAINS;
D O I
10.1093/bioinformatics/btv271
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We announce the release of kSNP3.0, a program for SNP identification and phylogenetic analysis without genome alignment or the requirement for reference genomes. kSNP3.0 is a significantly improved version of kSNP v2.
引用
收藏
页码:2877 / 2878
页数:2
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