Prochlorococcusphage ferredoxin: structural characterization and electron transfer to cyanobacterial sulfite reductases

被引:9
作者
Campbell, Ian J. [1 ,2 ]
Olmos, Jose Luis, Jr. [1 ,2 ]
Xu, Weijun [2 ]
Kahanda, Dimithree [2 ]
Atkinson, Joshua T. [2 ]
Sparks, Othneil Noble [2 ]
Miller, Mitchell D. [2 ]
Phillips, George N., Jr. [2 ,3 ]
Bennett, George N. [2 ,4 ]
Silberg, Jonathan J. [2 ,4 ,5 ]
机构
[1] Rice Univ, Biochem & Cell Biol Grad Program, Houston, TX USA
[2] Rice Univ, Dept Biosci, Houston, TX 77005 USA
[3] Rice Univ, Dept Chem, Houston, TX USA
[4] Rice Univ, Dept Chem & Biomol Engn, Houston, TX 77005 USA
[5] Rice Univ, Dept Bioengn, Houston, TX 77005 USA
关键词
cyanobacteria; cyanophage; marine; bacteriophage; reductase; hydrogen sulfide; structural biology; electron transfer; ferredoxin; sulfite reductase; 2FE-2S FERREDOXIN; IRON-SULFUR; DIFFERENTIAL INTERACTION; NITRITE REDUCTASE; TRANSFER COMPLEX; PROTEIN FAMILY; PHOTOSYSTEM-I; MARINE VIRUS; OXIDOREDUCTASE; EVOLUTION;
D O I
10.1074/jbc.RA120.013501
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Marine cyanobacteria are infected by phages whose genomes encode ferredoxin (Fd) electron carriers. These Fds are thought to redirect the energy harvested from light to phage-encoded oxidoreductases that enhance viral fitness, but it is unclear how the biophysical properties and partner specificities of phage Fds relate to those of photosynthetic organisms. Here, results of a bioinformatics analysis using a sequence similarity network revealed that phage Fds are most closely related to cyanobacterial Fds that transfer electrons from photosystems to oxidoreductases involved in nutrient assimilation. Structural analysis of myovirus P-SSM2 Fd (pssm2-Fd), which infects the cyanobacteriumProchlorococcus marinus, revealed high levels of similarity to cyanobacterial Fds (root mean square deviations of <= 0.5 angstrom). Additionally, pssm2-Fd exhibited a low midpoint reduction potential (-336 mVversusa standard hydrogen electrode), similar to other photosynthetic Fds, although it had lower thermostability (T-m= 28 degrees C) than did many other Fds. When expressed in anEscherichia colistrain deficient in sulfite assimilation, pssm2-Fd complemented bacterial growth when coexpressed with aP. marinussulfite reductase, revealing that pssm2-Fd can transfer electrons to a host protein involved in nutrient assimilation. The high levels of structural similarity with cyanobacterial Fds and reactivity with a host sulfite reductase suggest that phage Fds evolved to transfer electrons to cyanobacterially encoded oxidoreductases.
引用
收藏
页码:10610 / 10623
页数:14
相关论文
共 105 条
[91]   CIRCULAR-DICHROISM AND MAGNETIC CIRCULAR-DICHROISM OF IRON-SULFUR PROTEINS [J].
STEPHENS, PJ ;
THOMSON, AJ ;
DUNN, JBR ;
KEIDERLING, TA ;
RAWLINGS, J ;
RAO, KK ;
HALL, DO .
BIOCHEMISTRY, 1978, 17 (22) :4770-4778
[92]   Three Prochlorococcus cyanophage genomes:: Signature features and ecological interpretations [J].
Sullivan, MB ;
Coleman, ML ;
Weigele, P ;
Rohwer, F ;
Chisholm, SW .
PLOS BIOLOGY, 2005, 3 (05) :790-806
[93]   Cyanophages infecting the oceanic cyanobacterium Prochlorococcus [J].
Sullivan, MB ;
Waterbury, JB ;
Chisholm, SW .
NATURE, 2003, 424 (6952) :1047-1051
[94]   Strong Genome-Wide Selection Early in the Evolution of Prochlorococcus Resulted in a Reduced Genome through the Loss of a Large Number of Small Effect Genes [J].
Sun, Zhiyi ;
Blanchard, Jeffrey L. .
PLOS ONE, 2014, 9 (03)
[95]   Structure of spinach nitrite reductase:: Implications for multi-electron reactions by the iron-sulfur:siroheme cofactor [J].
Swamy, U ;
Wang, MT ;
Tripathy, JN ;
Kim, SK ;
Hirasawa, M ;
Knaff, DB ;
Allen, JP .
BIOCHEMISTRY, 2005, 44 (49) :16054-16063
[96]  
TA DT, 1992, J BIOL CHEM, V267, P11120
[97]   Pattern of Expression and Substrate Specificity of Chloroplast Ferredoxins from Chlamydomonas reinhardtii [J].
Terauchi, Aimee M. ;
Lu, Shu-Fen ;
Zaffagnini, Mirko ;
Tappa, Shane ;
Hirasawa, Masakazu ;
Tripathy, Jatindra N. ;
Knaff, David B. ;
Farmer, Patrick J. ;
Lemaire, Stephane D. ;
Hase, Toshiharu ;
Merchant, Sabeeha S. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (38) :25867-25878
[98]  
Thorn A, 2011, J APPL CRYSTALLOGR, V44, P1285, DOI [10.1107/S00218898110417681285, 10.1107/S0021889811041768]
[99]   Rapid diversification of marine picophytoplankton with dissimilar light-harvesting structures inferred from sequences of Prochlorococcus and Synechococcus (Cyanobacteria) [J].
Urbach, E ;
Scanlan, DJ ;
Distel, DL ;
Waterbury, JB ;
Chisholm, SW .
JOURNAL OF MOLECULAR EVOLUTION, 1998, 46 (02) :188-201
[100]   The active conformation of glutamate synthase and its binding to ferredoxin [J].
van den Heuvel, RHH ;
Svergun, DI ;
Petoukhov, MV ;
Coda, A ;
Curti, B ;
Ravasio, S ;
Vanoni, MA ;
Mattevi, A .
JOURNAL OF MOLECULAR BIOLOGY, 2003, 330 (01) :113-128