ALKBH5 Is a Mammalian RNA Demethylase that Impacts RNA Metabolism and Mouse Fertility

被引:2758
作者
Zheng, Guanqun [1 ]
Dahl, John Arne [3 ]
Niu, Yamei [2 ]
Fedorcsak, Peter [4 ]
Huang, Chun-Min [2 ]
Li, Charles J. [1 ]
Vagbo, Cathrine B. [6 ]
Shi, Yue [2 ,7 ]
Wang, Wen-Ling [2 ,7 ]
Song, Shu-Hui [5 ]
Lu, Zhike [1 ]
Bosmans, Ralph P. G. [1 ]
Dai, Qing [1 ]
Hao, Ya-Juan [2 ,7 ]
Yang, Xin [2 ,7 ]
Zhao, Wen-Ming [5 ]
Tong, Wei-Min [8 ,9 ,10 ]
Wang, Xiu-Jie [11 ]
Bogdan, Florian [3 ]
Furu, Kari [3 ]
Fu, Ye [1 ]
Jia, Guifang [1 ]
Zhao, Xu [2 ,7 ]
Liu, Jun [12 ,13 ]
Krokan, Hans E. [6 ]
Klungland, Arne [3 ]
Yang, Yun-Gui [2 ,7 ]
He, Chuan [1 ]
机构
[1] Univ Chicago, Inst Biophys Dynam, Dept Chem, Chicago, IL 60637 USA
[2] Chinese Acad Sci, Beijing Inst Genom, Dis Genom & Individualized Med Lab, Genome Struct & Stabil Grp,BIG CAS OSLO Genome Re, Beijing 100029, Peoples R China
[3] Oslo Univ Hosp, BIG CAS OSLO Genome Res Cooperat, Inst Med Microbiol, Ctr Mol Biol & Neurosci, N-0027 Oslo, Norway
[4] Oslo Univ Hosp, Dept Gynecol, Rikshosp, N-0027 Oslo, Norway
[5] Chinese Acad Sci, Beijing Inst Genom, Core Genom Facil, Beijing 100029, Peoples R China
[6] Norwegian Univ Sci & Technol, Dept Canc Res & Mol Med, N-7489 Trondheim, Norway
[7] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
[8] Chinese Acad Med Sci, Inst Basic Med Sci, Dept Pathol, Beijing 100005, Peoples R China
[9] Chinese Acad Med Sci, Inst Basic Med Sci, Ctr Expt Anim Res, Beijing 100005, Peoples R China
[10] Peking Union Med Coll, Beijing 100005, Peoples R China
[11] Chinese Acad Sci, Inst Genet & Dev Biol, Beijing 100101, Peoples R China
[12] Peking Univ, Coll Chem & Mol Engn, Beijing 100871, Peoples R China
[13] Peking Univ, Synthet & Funct Biomol Ctr, Beijing 100871, Peoples R China
基金
美国国家卫生研究院; 中国国家自然科学基金;
关键词
MESSENGER-RNA; GENE-EXPRESSION; FTO GENE; OXIDATIVE DEMETHYLATION; TRANSLATION INITIATION; HISTONE DEMETHYLATION; NUCLEAR-RNA; DNA; ASSOCIATION; N6-METHYLADENOSINE;
D O I
10.1016/j.molcel.2012.10.015
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
N-6-methyladenosine (m(6)A) is the most prevalent internal modification of messenger RNA (mRNA) in higher eukaryotes. Here we report ALKBH5 as another mammalian demethylase that oxidatively reverses m(6)A in mRNA in vitro and in vivo. This demethylation activity of ALKBH5 significantly affects mRNA export and RNA metabolism as well as the assembly of mRNA processing factors in nuclear speckles. Alkbh5-deficient male mice have increased m(6)A in mRNA and are characterized by impaired fertility resulting from apoptosis that affects meiotic metaphase-stage spermatocytes. In accordance with this defect, we have identified in mouse testes 1,551 differentially expressed genes that cover broad functional categories and include spermatogenesis-related mRNAs involved in the p53 functional interaction network. The discovery of this RNA demethylase strongly suggests that the reversible m(6)A modification has fundamental and broad functions in mammalian cells.
引用
收藏
页码:18 / 29
页数:12
相关论文
共 66 条
  • [1] Achanzar WE, 1997, J CELL SCI, V110, P1073
  • [2] Reorganizing the protein space at the Universal Protein Resource (UniProt)
    Apweiler, Rolf
    Martin, Maria Jesus
    O'Donovan, Claire
    Magrane, Michele
    Alam-Faruque, Yasmin
    Antunes, Ricardo
    Casanova, Elisabet Barrera
    Bely, Benoit
    Bingley, Mark
    Bower, Lawrence
    Bursteinas, Borisas
    Chan, Wei Mun
    Chavali, Gayatri
    Da Silva, Alan
    Dimmer, Emily
    Eberhardt, Ruth
    Fazzini, Francesco
    Fedotov, Alexander
    Garavelli, John
    Castro, Leyla Garcia
    Gardner, Michael
    Hieta, Reija
    Huntley, Rachael
    Jacobsen, Julius
    Legge, Duncan
    Liu, Wudong
    Luo, Jie
    Orchard, Sandra
    Patient, Samuel
    Pichler, Klemens
    Poggioli, Diego
    Pontikos, Nikolas
    Pundir, Sangya
    Rosanoff, Steven
    Sawford, Tony
    Sehra, Harminder
    Turner, Edward
    Wardell, Tony
    Watkins, Xavier
    Corbett, Matt
    Donnelly, Mike
    van Rensburg, Pieter
    Goujon, Mickael
    McWilliam, Hamish
    Lopez, Rodrigo
    Xenarios, Ioannis
    Bougueleret, Lydie
    Bridge, Alan
    Poux, Sylvain
    Redaschi, Nicole
    [J]. NUCLEIC ACIDS RESEARCH, 2012, 40 (D1) : D71 - D75
  • [3] Gene Ontology: tool for the unification of biology
    Ashburner, M
    Ball, CA
    Blake, JA
    Botstein, D
    Butler, H
    Cherry, JM
    Davis, AP
    Dolinski, K
    Dwight, SS
    Eppig, JT
    Harris, MA
    Hill, DP
    Issel-Tarver, L
    Kasarskis, A
    Lewis, S
    Matese, JC
    Richardson, JE
    Ringwald, M
    Rubin, GM
    Sherlock, G
    [J]. NATURE GENETICS, 2000, 25 (01) : 25 - 29
  • [4] The mRNA-Bound Proteome and Its Global Occupancy Profile on Protein-Coding Transcripts
    Baltz, Alexander G.
    Munschauer, Mathias
    Schwanhaeusser, Bjoern
    Vasile, Alexandra
    Murakawa, Yasuhiro
    Schueler, Markus
    Youngs, Noah
    Penfold-Brown, Duncan
    Drew, Kevin
    Milek, Miha
    Wyler, Emanuel
    Bonneau, Richard
    Selbach, Matthias
    Dieterich, Christoph
    Landthaler, Markus
    [J]. MOLECULAR CELL, 2012, 46 (05) : 674 - 690
  • [5] Yeast targets for mRNA methylation
    Bodi, Zsuzsanna
    Button, James D.
    Grierson, Donald
    Fray, Rupert G.
    [J]. NUCLEIC ACIDS RESEARCH, 2010, 38 (16) : 5327 - 5335
  • [6] Bokar JA, 1997, RNA, V3, P1233
  • [7] Bokar JA, 2005, TOP CURR GENET, V12, P141, DOI 10.1007/b106365
  • [8] EFFECT OF UNDERMETHYLATION ON MESSENGER-RNA CYTOPLASMIC APPEARANCE AND HALF-LIFE
    CAMPER, SA
    ALBERS, RJ
    COWARD, JK
    ROTTMAN, FM
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 1984, 4 (03) : 538 - 543
  • [9] The RNA modification database, RNAMDB: 2011 update
    Cantara, William A.
    Crain, Pamela F.
    Rozenski, Jef
    McCloskey, James A.
    Harris, Kimberly A.
    Zhang, Xiaonong
    Vendeix, Franck A. P.
    Fabris, Daniele
    Agris, Paul F.
    [J]. NUCLEIC ACIDS RESEARCH, 2011, 39 : D195 - D201
  • [10] FGRF-1 signaling is involved in spermiogenesis and sperm capacitation
    Cotton, L
    Gibbs, GM
    Sanchez-Partida, LG
    Morrison, JR
    de Kretser, DM
    O'Bryan, MK
    [J]. JOURNAL OF CELL SCIENCE, 2006, 119 (01) : 75 - 84