Improved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestans

被引：9

作者：

Lee, Yoonyoung ^{[1
]}

Cho, Kwang-Soo ^{[2
,4
]}

Seo, Jin-Hee ^{[2
]}

Sohn, Kee Hoon ^{[1
,3
]}

Prokchorchik, Maxim ^{[1
]}

机构：

[1] Pohang Univ Sci & Technol, Dept Life Sci, Pohang 37673, South Korea

[2] Rural Dev Adm, Highland Agr Res Inst, Potato Res Team, Gangwon 25342, South Korea

[3] Pohang Univ Sci & Technol, Sch Interdisciplinary Biosci & Bioengn, Pohang 37673, South Korea

[4] Upland Crop Breeding Res Div, Rural Dev Adm, Miryang 50424, South Korea

来源：

MOLECULAR PLANT-MICROBE INTERACTIONS | 2020年 / 33卷 / 08期

关键词：

genomics; potato late blight; Phytophthora infestans; Solanum tuberosum; RXLR EFFECTORS;

D O I：

10.1094/MPMI-02-20-0023-A

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Phytophthora infestans is a devastating pathogen causing potato late blight (Solanum tuberosum). Here we report the sequencing, assembly and genome annotation for two Phytophthora infestans isolates sampled in Republic of Korea. Genome sequencing was carried out using long read (Oxford Nanopore) and short read (Illumina Nextseq) sequencing technologies that significantly improved the contiguity and quality of P. infestans genome assembly. Our resources would help researchers better understand the molecular mechanisms by which P. infestans causes late blight disease in the future.

引用

页码：1025 / 1028

页数：4

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