Identification of triazolo[4,5-b] pyrazine derivatives as hepatocyte growth factor receptor inhibitors through structure-activity relationships and molecular docking simulations

被引:12
作者
Dong, Minghui [1 ]
Ren, Yujie [1 ]
Gao, Xiaodong [1 ]
机构
[1] Shanghai Inst Technol, Sch Chem & Environm Engn, Shanghai, Peoples R China
关键词
c-MET; Cancer therapy; 3D-QSAR; Molecular docking; Analogs design; C-MET; SCATTER-FACTOR; SIMILARITY INDEXES; FIELD ANALYSIS; METASTASIS; BINDING; CANCER; SELECTIVITY; DISCOVERY; POTENT;
D O I
10.1016/j.bmcl.2015.08.025
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
c-MET is a receptor tyrosine kinase and potential oncological target for cancer therapy. The activities of 1,2,3-triazolo[4,5-b] pyrazine series of c-MET inhibitors were analyzed according to the three-dimensional quantitative structure-activity relationship and molecular docking methods. The results indicated that the hydrophobic and electrostatic fields play key roles in activity and QSAR model was reliable enough for activity prediction. Moreover, the docking results do validate the predicted 3D-QSAR scores, vital residues Asp1222, Asp1231, Met1160, Tyr1259 and Tyr1230 found in binding site. Four new c-MET inhibitor analogs designed in this Letter which are being currently synthesized by our laboratories. (C) 2015 Elsevier Ltd. All rights reserved.
引用
收藏
页码:4118 / 4126
页数:9
相关论文
共 35 条
[1]  
BELLUSCI S, 1994, ONCOGENE, V9, P1091
[2]   Met, metastasis, motility and more [J].
Birchmeier, C ;
Birchmeier, W ;
Gherardi, E ;
Vande Woude, GF .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2003, 4 (12) :915-925
[3]   Opinion -: Invasive growth:: a MET-driven genetic programme for cancer and stem cells [J].
Boccaccio, Carla ;
Comoglio, Paolo M. .
NATURE REVIEWS CANCER, 2006, 6 (08) :637-645
[4]   Three-dimensional quantitative structure-activity relationship analyses using comparative molecular field analysis and comparative molecular similarity indices analysis to elucidate selectivity differences of inhibitors binding to trypsin, thrombin, and factor Xa [J].
Böhm, M ;
Stürzebecher, J ;
Klebe, G .
JOURNAL OF MEDICINAL CHEMISTRY, 1999, 42 (03) :458-477
[5]   Combined 3D-QSAR, molecular docking, and molecular dynamics study on potent cyclohexene-based influenza neuraminidase inhibitors [J].
Cheng, Li Ping ;
Huang, Xin Ying ;
Wang, Zhi ;
Kai, Zhen Peng ;
Wu, Fan Hong .
MONATSHEFTE FUR CHEMIE, 2014, 145 (07) :1213-1225
[6]   VALIDATION OF THE GENERAL-PURPOSE TRIPOS 5.2 FORCE-FIELD [J].
CLARK, M ;
CRAMER, RD ;
VANOPDENBOSCH, N .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1989, 10 (08) :982-1012
[7]   COMPARATIVE MOLECULAR-FIELD ANALYSIS (COMFA) .1. EFFECT OF SHAPE ON BINDING OF STEROIDS TO CARRIER PROTEINS [J].
CRAMER, RD ;
PATTERSON, DE ;
BUNCE, JD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (18) :5959-5967
[8]   Lessons from (S)-6-(1-(6-(1-Methyl-1H-pyrazol-4-yl)-[1,2,4]triazolo[4,3-b]pyridazin-3-yl)ethyl)quinoline (PF-04254644), an Inhibitor of Receptor Tyrosine Kinase c-Met with High Protein Kinase Selectivity but Broad Phosphodiesterase Family Inhibition Leading to Myocardial Degeneration in Rats [J].
Cui, J. Jean ;
Shen, Hong ;
Tran-Dube, Michelle ;
Nambu, Mitchell ;
McTigue, Michele ;
Grodsky, Neil ;
Ryan, Kevin ;
Yamazaki, Shinji ;
Aguirre, Shirley ;
Parker, Max ;
Li, Qiuhua ;
Zou, Helen ;
Christensen, James .
JOURNAL OF MEDICINAL CHEMISTRY, 2013, 56 (17) :6651-6665
[9]   Discovery of a Novel Class of Exquisitely Selective Mesenchymal-Epithelial Transition Factor (c-MET) Protein Kinase Inhibitors and Identification of the Clinical Candidate 2-(4-(1-(Quinolin-6-ylmethyl)-1H-[1,2,3]triazolo[4,5-b]pyrazin-6-yl)-1H-pyrazol-1-yl)ethanol (PF-04217903) for the Treatment of Cancer [J].
Cui, J. Jean ;
McTigue, Michele ;
Nambu, Mitchell ;
Tran-Dube, Michelle ;
Pairish, Mason ;
Shen, Hong ;
Jia, Lei ;
Cheng, Hengmiao ;
Hoffman, Jacqui ;
Le, Phuong ;
Jalaie, Mehran ;
Goetz, Gilles H. ;
Ryan, Kevin ;
Grodsky, Neil ;
Deng, Ya-Li ;
Parker, Max ;
Timofeevski, Sergei ;
Murray, Brion W. ;
Yamazaki, Shinji ;
Aguirre, Shirley ;
Li, Qiuhua ;
Zou, Helen ;
Christensen, James .
JOURNAL OF MEDICINAL CHEMISTRY, 2012, 55 (18) :8091-8109
[10]   ITERATIVE PARTIAL EQUALIZATION OF ORBITAL ELECTRONEGATIVITY - A RAPID ACCESS TO ATOMIC CHARGES [J].
GASTEIGER, J ;
MARSILI, M .
TETRAHEDRON, 1980, 36 (22) :3219-3228