Conformational analysis of bis(trigonelline) hydrochloride, perchlorate and their monohydrates by the B3LYP calculations, X-ray diffraction and vibrational spectra

被引:26
作者
Szafran, M [1 ]
Katrusiak, A [1 ]
Koput, J [1 ]
Dega-Szafran, Z [1 ]
机构
[1] Adam Mickiewicz Univ, Fac Chem, PL-60780 Poznan, Poland
关键词
trigonelline; conformation; hydrogen bond; electrostatic interactions; X-ray diffraction; DFT calculations; FTIR and Raman spectra;
D O I
10.1016/j.molstruc.2005.06.055
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In the crystal structure of bis(trigonelline) hydrochloride monohydrate, (TRG)(2)H center dot Cl center dot H2O, the trigonelline units are hemiprotonated and form homoconjugated cations through short asymmetric 0 center dot H center dot 0 hydrogen bonds of 2.456(4) angstrom in length. The H-bonded proton is closer to TRG which has shorter contacts with Cl- anion. The water molecules and Cl- anions are linked alternatively by hydrogen bonds of lengths 3.247(5) and 3.354(4) A into planar zigzag chains along the [z] direction. The Cl- anion additionally displays electrostatic interactions with two positively charged nitrogen atoms of the neighboring TRG molecules. The two most stable conformers of (TRG)2H center dot Cl center dot H2O, three of (TRG)2H center dot ClO4 center dot H2O and eight others were analyzed by the B3LYP/6-3 1G(d,p) calculations in order to determine the influence of the anions and water molecule on the hydrogen bond in the homoconjugated TRG center dot H center dot TRG unit. The FTIR spectrum of (TRG)2H center dot Cl center dot H2O shows a broad and intense absorption in the 1500-400 cm(-1) region, typical of short hydrogen bonds. The band at 3383 cm(-1) confirms a medium-strong hydrogen bonds between the water molecules and Cl- anions. In the complex crystallized from CH3OD this broad absorption is replaced by two bands at 2500 and 1900 cm which are similar to those in the spectra of TRG center dot D2O and TRGD center dot Cl, respectively. (c) 2005 Elsevier B.V. All rights reserved.
引用
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页码:98 / 108
页数:11
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