Low-frequency Raman scattering study of six nucleosides

被引：0
作者：
Koontz, C. A. [1 ]
Lee, S. A. [1 ]
机构：
[1] Univ Toledo, Dept Phys & Astron, Toledo, OH 43606 USA
来源：
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS | 2014年 / 32卷 / 07期
关键词：
nucleosides; low-frequency vibrations; Raman scattering; DENSITY-FUNCTIONAL THEORY; CRYSTAL-STRUCTURE; MOLECULAR-STRUCTURE; VIBRATIONAL-MODES; COLLECTIVE MODES; NUCLEIC-ACIDS; DNA; GUANOSINE; CONFIGURATION; ORIGIN;
D O I：
10.1080/07391102.2013.802996
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
Raman spectroscopy was used to study the low-frequency (⩽200 cm(-1)) vibrations in crystalline samples of six naturally occurring nucleosides: deoxythymidine (dT), deoxycytidine (dC), deoxyadenosine (dA), uridine (rU), cytidine (rC), and adenosine (rA). Such low-frequency vibrations are important for biological processes in which the conformation of a nucleic acid molecule changes. These experiments also provide a test for the low-frequency vibrational modes of dT, dC, and dA predicted by Shishkin et al.
引用
收藏
页码：1148 / 1154
页数：7
相关论文
共 23 条
  • [1] MOLECULAR CONFIGURATION IN SODIUM THYMONUCLEATE
    FRANKLIN, RE
    GOSLING, RG
    [J]. NATURE, 1953, 171 (4356) : 740 - 741
  • [2] A REFINEMENT OF CRYSTAL STRUCTURE OF CYTIDINE
    FURBERG, S
    PETERSEN, CS
    ROMMING, C
    [J]. ACTA CRYSTALLOGRAPHICA, 1965, 18 : 313 - &
  • [3] Analysis of the structural and vibrational properties of RNA building blocks by means of neutron inelastic scattering and density functional theory calculations
    Gaigeot, MP
    Leulliot, N
    Ghomi, M
    Jobic, H
    Coulombeau, C
    Bouloussa, O
    [J]. CHEMICAL PHYSICS, 2000, 261 (1-2) : 217 - 237
  • [4] CRYSTAL-STRUCTURE OF URIDINE
    GREEN, EA
    ROSENSTEIN, RD
    SHIONO, R
    ABRAHAM, DJ
    TRUS, BL
    MARSH, RE
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1975, 31 (JAN15): : 102 - 107
  • [5] CRYSTAL-STRUCTURE OF ADENOSINE
    LAI, TF
    MARSH, RE
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL CRYSTALLOGRAPHY AND CRYSTAL CHEMISTRY, 1972, B 28 (JUL15): : 1982 - &
  • [6] Drug binding to DNA: Observation of the drug-DNA hydrogen-bond-stretching modes of netropsin bound to DNA via Raman spectroscopy
    Lee, SA
    Rupprecht, A
    Chen, YZ
    [J]. PHYSICAL REVIEW LETTERS, 1998, 80 (10) : 2241 - 2244
  • [7] THE ORIGIN OF THE A TO B TRANSITION IN DNA FIBERS AND FILMS
    LINDSAY, SM
    LEE, SA
    POWELL, JW
    WEIDLICH, T
    DEMARCO, C
    LEWEN, GD
    TAO, NJ
    RUPPRECHT, A
    [J]. BIOPOLYMERS, 1988, 27 (06) : 1015 - 1043
  • [8] A density functional theory study of vibrational coupling between ribose and base rings of nucleic acids with ribosyl guanosine as a model system
    Pelmenschikov, A
    Hovorun, DM
    Shishkin, OV
    Leszczynski, J
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2000, 113 (14) : 5986 - 5990
  • [9] INVESTIGATION OF FAR-INFRARED VIBRATIONAL-MODES IN POLYNUCLEOTIDES
    POWELL, JW
    EDWARDS, GS
    GENZEL, L
    KREMER, F
    WITTLIN, A
    KUBASEK, W
    PETICOLAS, W
    [J]. PHYSICAL REVIEW A, 1987, 35 (09): : 3929 - 3939
  • [10] PROHOFSKY E, 1995, STAT MECH STABILITY
123