The ECOTOXicology Knowledgebase: A Curated Database of Ecologically Relevant Toxicity Tests to Support Environmental Research and Risk Assessment

被引:129
作者
Olker, Jennifer H. [1 ]
Elonen, Colleen M. [1 ]
Pilli, Anne [2 ]
Anderson, Arne [2 ]
Kinziger, Brian [2 ]
Erickson, Stephen [2 ]
Skopinski, Michael [2 ]
Pomplun, Anita [2 ]
LaLone, Carlie A. [1 ]
Russom, Christine L. [1 ]
Hoff, Dale [1 ]
机构
[1] US EPA, Off Res & Dev, Ctr Computat Toxicol & Exposure, Great Lakes Toxicol & Ecol Div, Duluth, MN 55804 USA
[2] Gen Dynam Informat Technol, Duluth, MN USA
关键词
Ecotoxicology; Environmental toxicology; Database; Systematic review; New approach methodologies; Controlled vocabulary; Interoperability; Chemical assessment; EVIDENCE-BASED TOXICOLOGY; ADVERSE OUTCOME PATHWAY; FRESH-WATER; SYSTEMATIC REVIEWS; RELIABILITY; PESTICIDES; DISTRIBUTIONS; REQUIREMENTS; METHODOLOGY; INSECTICIDE;
D O I
10.1002/etc.5324
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
The need for assembled existing and new toxicity data has accelerated as the amount of chemicals introduced into commerce continues to grow and regulatory mandates require safety assessments for a greater number of chemicals. To address this evolving need, the ECOTOXicology Knowledgebase (ECOTOX) was developed starting in the 1980s and is currently the world's largest compilation of curated ecotoxicity data, providing support for assessments of chemical safety and ecological research through systematic and transparent literature review procedures. The recently released version of ECOTOX (Ver 5, www.epa.gov/ecotox) provides single-chemical ecotoxicity data for over 12,000 chemicals and ecological species with over one million test results from over 50,000 references. Presented is an overview of ECOTOX, detailing the literature review and data curation processes within the context of current systematic review practices and discussing how recent updates improve the accessibility and reusability of data to support the assessment, management, and research of environmental chemicals. Relevant and acceptable toxicity results are identified from studies in the scientific literature, with pertinent methodological details and results extracted following well-established controlled vocabularies and newly extracted toxicity data added quarterly to the public website. Release of ECOTOX, Ver 5, included an entirely redesigned user interface with enhanced data queries and retrieval options, visualizations to aid in data exploration, customizable outputs for export and use in external applications, and interoperability with chemical and toxicity databases and tools. This is a reliable source of curated ecological toxicity data for chemical assessments and research and continues to evolve with accessible and transparent state-of-the-art practices in literature data curation and increased interoperability to other relevant resources. (C) 2022 SETAC.
引用
收藏
页码:1520 / 1539
页数:20
相关论文
共 92 条
  • [11] THE TOXICITY OF ALUMINUM TO 2 ACIDO-TOLERANT GREEN-ALGAE
    CLAESSON, A
    TORNQVIST, L
    [J]. WATER RESEARCH, 1988, 22 (08) : 977 - 983
  • [12] Creation of a Curated Aquatic Toxicology Database: EnviroTox
    Connors, Kristin A.
    Beasley, Amy
    Barron, Mace G.
    Belanger, Scott E.
    Bonnell, Mark
    Brill, Jessica L.
    de Zwart, Dick
    Kienzler, Aude
    Krailler, Jesse
    Otter, Ryan
    Phillips, Joshua L.
    Embry, Michelle R.
    [J]. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY, 2019, 38 (05) : 1062 - 1073
  • [13] The Utility of Zebrafish as a Model for Screening Developmental Neurotoxicity
    d'Amora, Marta
    Giordani, Silvia
    [J]. FRONTIERS IN NEUROSCIENCE, 2018, 12
  • [14] Dose-response relationships and statistical performance of a battery of bacterial gene profiling assays
    Dardenne, F.
    Nobels, I.
    De Coen, W.
    Blust, R.
    [J]. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2007, 75 (01) : 223 - 234
  • [15] Effects of Pesticide Formulations and Active Ingredients on the Coelenterate Hydra attenuata (Pallas, 1766)
    Demetrio, Pablo M.
    Bulus Rossini, Gustavo D.
    Bonetto, Carlos A.
    Ronco, Alicia E.
    [J]. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY, 2012, 88 (01) : 15 - 19
  • [16] Chironomus sancticaroli (Diptera, Chironomidae) as a Sensitive Tropical Test Species in Laboratory Bioassays Evaluating Metals (Copper and Cadmium) and Field Testing
    Dornfeld, Carolina Buso
    Rodgher, Suzelei
    Negri, Rogerio Galante
    Gaeta Espindola, Evaldo Luiz
    Daam, Michiel A.
    [J]. ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY, 2019, 76 (01) : 42 - 50
  • [17] The NORMAN Association and the European Partnership for Chemicals Risk Assessment (PARC): let's cooperate!
    Dulio, Valeria
    Koschorreck, Jan
    van Bavel, Bert
    van den Brink, Paul
    Hollender, Juliane
    Munthe, John
    Schlabach, Martin
    Aalizadeh, Reza
    Agerstrand, Marlene
    Ahrens, Lutz
    Allan, Ian
    Alygizakis, Nikiforos
    Barcelo, Damia
    Bohlin-Nizzetto, Pernilla
    Boutroup, Susanne
    Brack, Werner
    Bressy, Adele
    Christensen, Jan H.
    Cirka, Lubos
    Covaci, Adrian
    Derksen, Anja
    Deviller, Genevieve
    Dingemans, Milou M. L.
    Engwall, Magnus
    Fatta-Kassinos, Despo
    Gago-Ferrero, Pablo
    Hernandez, Flix
    Herzke, Dorte
    Hilscherova, Klara
    Hollert, Henner
    Junghans, Marion
    Kasprzyk-Hordern, Barbara
    Keiter, Steffen
    Kools, Stefan A. E.
    Kruve, Anneli
    Lambropoulou, Dimitra
    Lamoree, Marja
    Leonards, Pim
    Lopez, Benjamin
    de Alda, Miren Lopez
    Lundy, Lian
    Makovinska, Jarmila
    Marigomez, Ionan
    Martin, Jonathan W.
    McHugh, Brendan
    Miege, Ccile
    O'Toole, Simon
    Perkola, Noora
    Polesello, Stefano
    Posthuma, Leo
    [J]. ENVIRONMENTAL SCIENCES EUROPE, 2020, 32 (01)
  • [18] Etterson M., 2020, EPA600R181
  • [19] European Chemicals Agency, 2017, ECHA17R02EN, DOI [10.2823/023078, DOI 10.2823/023078]
  • [20] An assessment of the potential of the microbial assay for risk assessment (MARA) for ecotoxicological testing
    Fai, Patricia Bi
    Grant, Alastair
    [J]. ECOTOXICOLOGY, 2010, 19 (08) : 1626 - 1633