Association between genetic variants in pre-miRNA and colorectal cancer risk in a Chinese population

被引:59
作者
Lv, Meili [1 ]
Dong, Wei [1 ]
Li, Lijuan [2 ]
Zhang, Lushun [2 ]
Su, Xiaowei [2 ]
Wang, Li [2 ]
Gao, Linbo [3 ,4 ]
Zhang, Lin [2 ,3 ,4 ]
机构
[1] Sichuan Univ, West China Sch Preclin & Forens Med, Dept Immunol, Chengdu 610041, Sichuan, Peoples R China
[2] Sichuan Univ, West China Sch Preclin & Forens Med, Dept Forens Biol, Chengdu 610041, Sichuan, Peoples R China
[3] Sichuan Univ, West China Univ Hosp 2, Lab Mol Translat Med, Chengdu 610041, Sichuan, Peoples R China
[4] Minist Educ, Key Lab Obstet & Gynecol & Pediat Dis & Birth Def, Chengdu 610041, Sichuan, Peoples R China
关键词
Colorectal cancer; Pre-miRNA; Single-nucleotide polymorphism; CHRONIC LYMPHOCYTIC-LEUKEMIA; MICRORNA GENES; BREAST-CANCER; LUNG-CANCER; EXPRESSION; SUSCEPTIBILITY; METHYLATION; PROGRESSION; METASTASIS; LYMPHOMA;
D O I
10.1007/s00432-013-1456-7
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Single-nucleotide polymorphisms (SNPs) in pre-miRNAs may alter microRNA expression levels or processing and then contribute to the susceptibility of cancer development. We hypothesized that SNPs in pre-miRNAs may be associated with the risk of colorectal cancer (CRC). We genotyped four common polymorphisms (i.e., rs11614913, rs3746444, rs2910164, and rs2292832) in pre-miRNAs of 353 CRC patients and 540 healthy controls to investigate the association between the SNPs and the risk of CRC using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) assay. The rs11614913 CT, TT genotypes, and T allele were associated with an increased risk of CRC compared with the CC genotype and C allele (CT vs. CC: OR = 7.34, 95 % CI 3.76-14.34; TT vs. CC: OR = 13.66, 95 % CI 6.76-27.6; T vs. C: OR = 1.99, 95 % CI 1.63-2.42, respectively). Interestingly, using the rs2910164 GG genotype as a reference, the rs2910164 GC genotype was associated with an increased risk of CRC (OR = 1.49, 95 % CI 1.02-2.18), whereas the rs2910164 CC genotype was associated with a decreased risk of CRC (OR = 0.58, 95 % CI 0.37-0.93). When compared with the rs2910164G allele, rs2910164 C allele was associated with a reduced risk of CRC (OR = 0.80, 95 % CI 0.66-0.97, p = 0.02). These findings suggest that rs11614913 and rs2910164 polymorphisms may be associated with the etiology of CRC.
引用
收藏
页码:1405 / 1410
页数:6
相关论文
共 35 条
[1]   Matrix metalloprotease 16 expression is downregulated by microRNA-146a in spontaneously differentiating Caco-2 cells [J].
Astarci, Erhan ;
Bansan, Ayse E. Erson ;
Banerjee, Sreeparna .
DEVELOPMENT GROWTH & DIFFERENTIATION, 2012, 54 (02) :216-226
[2]   microRNAs in diseases: from candidate to modifier genes [J].
Bandiera, S. ;
Hatem, E. ;
Lyonnet, S. ;
Henrion-Caude, A. .
CLINICAL GENETICS, 2010, 77 (04) :306-313
[3]   The human let-7a-3 locus contains an epigenetically regulated microRNA gene with oncogenic function [J].
Brueckner, Bodo ;
Stresemann, Carlo ;
Kuner, Ruprecht ;
Mund, Cora ;
Musch, Tanja ;
Meister, Michael ;
Sueltmann, Holger ;
Lyko, Frank .
CANCER RESEARCH, 2007, 67 (04) :1419-1423
[4]   Frequent deletions and down-regulation of micro-RNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia [J].
Calin, GA ;
Dumitru, CD ;
Shimizu, M ;
Bichi, R ;
Zupo, S ;
Noch, E ;
Aldler, H ;
Rattan, S ;
Keating, M ;
Rai, K ;
Rassenti, L ;
Kipps, T ;
Negrini, M ;
Bullrich, F ;
Croce, CM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (24) :15524-15529
[5]   A MicroRNA signature associated with prognosis and progression in chronic lymphocytic leukemia [J].
Calin, GA ;
Ferracin, M ;
Cimmino, A ;
Di Leva, G ;
Shimizu, M ;
Wojcik, SE ;
Iorio, MV ;
Visone, R ;
Sever, NI ;
Fabbri, M ;
Iuliano, R ;
Palumbo, T ;
Pichiorri, F ;
Roldo, C ;
Garzon, R ;
Sevignani, C ;
Rassenti, L ;
Alder, H ;
Volinia, S ;
Liu, CG ;
Kipps, TJ ;
Negrini, M ;
Croce, CM .
NEW ENGLAND JOURNAL OF MEDICINE, 2005, 353 (17) :1793-1801
[6]   Transactivation of miR-34a by p53 broadly influences gene expression and promotes apoptosis [J].
Chang, Tsung-Cheng ;
Wentzel, Erik A. ;
Kent, Oliver A. ;
Ramachandran, Kalyani ;
Mullendore, Michael ;
Lee, Kwang Hyuck ;
Feldmann, Georg ;
Yamakuchi, Munekazu ;
Ferlito, Marcella ;
Lowenstein, Charles J. ;
Arking, Dan E. ;
Beer, Michael A. ;
Maitra, Anirban ;
Mendell, Joshua T. .
MOLECULAR CELL, 2007, 26 (05) :745-752
[7]   A variant in microRNA-196a2 is not associated with susceptibility to and progression of colorectal cancer in Chinese [J].
Chen, H. ;
Sun, L-Y. ;
Chen, L-L. ;
Zheng, H-Q. ;
Zhang, Q-F. .
INTERNAL MEDICINE JOURNAL, 2012, 42 (06) :E115-E119
[8]   Single nucleotide polymorphism associated with mature miR-125a alters the processing of pri-miRNA [J].
Duan, Ranhui ;
Pak, ChangHui ;
Jin, Peng .
HUMAN MOLECULAR GENETICS, 2007, 16 (09) :1124-1131
[9]   The association between two polymorphisms in pre-miRNAs and breast cancer risk: a meta-analysis [J].
Gao, Lin-Bo ;
Bai, Peng ;
Pan, Xin-Min ;
Jia, Jing ;
Li, Li-Juan ;
Liang, Wei-Bo ;
Tang, Ming ;
Zhang, Lu-Shun ;
Wei, Yong-Gang ;
Zhang, Lin .
BREAST CANCER RESEARCH AND TREATMENT, 2011, 125 (02) :571-574
[10]   Genetic variation in microRNA genes and prostate cancer risk in North Indian population [J].
George, Ginu P. ;
Gangwar, Ruchika ;
Mandal, Raju K. ;
Sankhwar, Satya N. ;
Mittal, Rama D. .
MOLECULAR BIOLOGY REPORTS, 2011, 38 (03) :1609-1615