Clinical and research applications of a brain tumor tissue bank in the age of precision medicine

被引:6
作者
Snyder, James [1 ,2 ]
Poisson, Laila M. [2 ]
Noushmehr, Houtan [2 ]
Castro, Ana V. [2 ]
deCarvalho, Ana C. [2 ]
Robin, Adam [2 ]
Mukherjee, Abir [3 ]
Lee, Ian [2 ]
Walbert, Tobias [1 ,2 ]
机构
[1] Henry Ford Hlth Syst, Dept Neurol, 2799 W Grand Blvd, Detroit, MI 48202 USA
[2] Henry Ford Hlth Syst, Dept Neurosurg, 2799 W Grand Blvd, Detroit, MI 48202 USA
[3] Henry Ford Hlth Syst, Dept Pathol, 2799 W Grand Blvd, Detroit, MI 48202 USA
关键词
GENOMIC ANALYSIS; DRUG DEVELOPMENT; XENOGRAFT MODEL; GLIOBLASTOMA; PDGFRA; TRIALS; GROWTH; GLIOMA; EGFR;
D O I
10.2217/pme-2018-0102
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Marked progress has been made recently in the treatment of patients with central nervous system (CNS) tumors, especially gliomas. However, because of the relative rarity of these tumors compared with other malignancies, advances in the molecular/genetic analysis leading to future targeted treatments rely on systematic, organized tissue banking. Several large multi-institutional efforts have utilized major tissue banks that have yielded valuable information that may lead to a better understanding of the pathogenesis of CNS tumors. This manuscript portrays best practices for the establishment and maintenance of a well-organized CNS tumor bank. In addition, annotation for clinical and research needs is explained. The potential benefits to clinical care, as well as basic science and translational research are also described.
引用
收藏
页码:145 / 156
页数:12
相关论文
共 47 条
[1]   Glioma through the looking GLASS: molecular evolution of diffuse gliomas and the Glioma Longitudinal Analysis Consortium [J].
Aldape, Kenneth ;
Amin, Samirkumar B. ;
Ashley, David M. ;
Barnholtz-Sloan, Jill S. ;
Bates, Amanda J. ;
Beroukhim, Rameen ;
Bock, Christoph ;
Brat, Daniel J. ;
Claus, Elizabeth B. ;
Costello, Joseph F. ;
de Groot, John F. ;
Finocchiaro, Gaetano ;
French, Pim J. ;
Gan, Hui K. ;
Griffith, Brent ;
Herold-Mende, Christel C. ;
Horbinski, Craig ;
Iavarone, Antonio ;
Kalkanis, Steven N. ;
Karabatsou, Konstantina ;
Kim, Hoon ;
Kouwenhoven, Mathilde C. M. ;
McDonald, Kerrie L. ;
Miletic, Hrvoje ;
Nam, Do-Hyun ;
Ng, Ho Keung ;
Niclou, Simone P. ;
Noushmehr, Houtan ;
Ormond, D. Ryan ;
Poisson, Laila M. ;
Reifenberger, Guido ;
Roncaroli, Federico ;
Sa, Jason K. ;
Smitt, Peter A. E. Sillevis ;
Smits, Marion ;
Souza, Camila F. ;
Tabatabai, Ghazaleh ;
Van Meir, Erwin G. ;
Verhaak, Roel G. W. ;
Watts, Colin ;
Wesseling, Pieter ;
Woehrer, Adelheid ;
Yung, W. K. Alfred ;
Jungk, Christine ;
Hau, Ann-Christin ;
van Dyck, Eric ;
Westerman, Bait A. ;
Yin, Julia ;
Abiola, Olajide ;
Zeps, Nikolaj .
NEURO-ONCOLOGY, 2018, 20 (07) :873-884
[2]  
[Anonymous], REFEREE STATUS
[3]  
[Anonymous], MACH LEARN MACH LEARN
[4]  
[Anonymous], CURR PROTOC PHARM
[5]  
[Anonymous], THER APPL RES GEN EF
[6]   Towards precision medicine [J].
Ashley, Euan A. .
NATURE REVIEWS GENETICS, 2016, 17 (09) :507-522
[7]   From the core to beyond the margin: a genomic picture of glioblastoma intratumor heterogeneity [J].
Aubry, Marc ;
de Tayrac, Marie ;
Etcheverry, Amandine ;
Clavreul, Anne ;
Saikali, Stephan ;
Menei, Philippe ;
Mosser, Jean .
ONCOTARGET, 2015, 6 (14) :12094-12109
[8]   NCBI GEO: archive for functional genomics data sets-update [J].
Barrett, Tanya ;
Wilhite, Stephen E. ;
Ledoux, Pierre ;
Evangelista, Carlos ;
Kim, Irene F. ;
Tomashevsky, Maxim ;
Marshall, Kimberly A. ;
Phillippy, Katherine H. ;
Sherman, Patti M. ;
Holko, Michelle ;
Yefanov, Andrey ;
Lee, Hyeseung ;
Zhang, Naigong ;
Robertson, Cynthia L. ;
Serova, Nadezhda ;
Davis, Sean ;
Soboleva, Alexandra .
NUCLEIC ACIDS RESEARCH, 2013, 41 (D1) :D991-D995
[9]   Genomic Characterization of Brain Metastases Reveals Branched Evolution and Potential Therapeutic Targets [J].
Brastianos, Priscilla K. ;
Carter, Scott L. ;
Santagata, Sandro ;
Cahill, Daniel P. ;
Taylor-Weiner, Amaro ;
Jones, Robert T. ;
Van Allen, Eliezer M. ;
Lawrence, Michael S. ;
Horowitz, Peleg M. ;
Cibulskis, Kristian ;
Ligon, Keith L. ;
Tabernero, Josep ;
Seoane, Joan ;
Martinez-Saez, Elena ;
Curry, William T. ;
Dunn, Ian F. ;
Paek, Sun Ha ;
Park, Sung-Hye ;
McKenna, Aaron ;
Chevalier, Aaron ;
Rosenberg, Mara ;
Barker, Frederick G., II ;
Gill, Corey M. ;
Van Hummelen, Paul ;
Thorner, Aaron R. ;
Johnson, Bruce E. ;
Hoang, Mai P. ;
Choueiri, Toni K. ;
Signoretti, Sabina ;
Sougnez, Carrie ;
Rabin, Michael S. ;
Lin, Nancy U. ;
Winer, Eric P. ;
Stemmer-Rachamimov, Anat ;
Meyerson, Matthew ;
Garraway, Levi ;
Gabriel, Stacey ;
Lander, Eric S. ;
Beroukhim, Rameen ;
Batchelor, Tracy T. ;
Baselga, Jose ;
Louis, David N. ;
Getz, Gad ;
Hahn, William C. .
CANCER DISCOVERY, 2015, 5 (11) :1164-1177
[10]   Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas [J].
Brat, Daniel J. ;
Verhaak, Roel G. W. ;
Al-dape, Kenneth D. ;
Yung, W. K. Alfred ;
Salama, Sofie R. ;
Cooper, Lee A. D. ;
Rheinbay, Esther ;
Miller, C. Ryan ;
Vitucci, Mark ;
Morozova, Olena ;
Robertson, A. Gordon ;
Noushmehr, Houtan ;
Laird, Peter W. ;
Cherniack, Andrew D. ;
Akbani, Rehan ;
Huse, Jason T. ;
Ciriello, Giovanni ;
Poisson, Laila M. ;
Barnholtz-Sloan, Jill S. ;
Berger, Mitchel S. ;
Brennan, Cameron ;
Colen, Rivka R. ;
Colman, Howard ;
Flanders, Adam E. ;
Giannini, Caterina ;
Grifford, Mia ;
Iavarone, Antonio ;
Jain, Rajan ;
Joseph, Isaac ;
Kim, Jaegil ;
Kasaian, Katayoon ;
Mikkelsen, Tom ;
Murray, Bradley A. ;
O'Neill, Brian Patrick ;
Pachter, Lior ;
Parsons, Donald W. ;
Sougnez, Carrie ;
Sulman, Erik P. ;
Vandenberg, Scott R. ;
Van Meir, Erwin G. ;
von Deimling, Andreas ;
Zhang, Hailei ;
Crain, Daniel ;
Lau, Kevin ;
Mallery, David ;
Morris, Scott ;
Paulauskis, Joseph ;
Penny, Robert ;
Shelton, Troy ;
Sherman, Mark .
NEW ENGLAND JOURNAL OF MEDICINE, 2015, 372 (26) :2481-2498