Wavelet analysis in ecology and epidemiology: impact of statistical tests
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作者:
Cazelles, Bernard
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UPMC, Ecole Normale Super, UMR 7625, F-75230 Paris 05, France
UPMC, IRD, UMMISCO UMI 209, F-93142 Bondy, FranceUPMC, Ecole Normale Super, UMR 7625, F-75230 Paris 05, France
Cazelles, Bernard
[1
,2
]
Cazelles, Kevin
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UPMC, Ecole Normale Super, UMR 7625, F-75230 Paris 05, FranceUPMC, Ecole Normale Super, UMR 7625, F-75230 Paris 05, France
Cazelles, Kevin
[1
]
Chavez, Mario
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机构:UPMC, Ecole Normale Super, UMR 7625, F-75230 Paris 05, France
Chavez, Mario
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[1] UPMC, Ecole Normale Super, UMR 7625, F-75230 Paris 05, France
[2] UPMC, IRD, UMMISCO UMI 209, F-93142 Bondy, France
Wavelet analysis is now frequently used to extract information from ecological and epidemiological time series. Statistical hypothesis tests are conducted on associated wavelet quantities to assess the likelihood that they are due to a random process. Such random processes represent null models and are generally based on synthetic data that share some statistical characteristics with the original time series. This allows the comparison of null statistics with those obtained from original time series. When creating synthetic datasets, different techniques of resampling result in different characteristics shared by the synthetic time series. Therefore, it becomes crucial to consider the impact of the resampling method on the results. We have addressed this point by comparing seven different statistical testing methods applied with different real and simulated data. Our results show that statistical assessment of periodic patterns is strongly affected by the choice of the resampling method, so two different resampling techniques could lead to two different conclusions about the same time series. Moreover, our results clearly show the inadequacy of resampling series generated by white noise and red noise that are nevertheless the methods currently used in the wide majority of wavelets applications. Our results highlight that the characteristics of a time series, namely its Fourier spectrum and autocorrelation, are important to consider when choosing the resampling technique. Results suggest that data-driven resampling methods should be used such as the hidden Markov model algorithm and the 'beta-surrogate' method.
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Univ Oslo, Dept Biol, Ctr Ecol & Evolutionary Synth, N-0316 Oslo, Norway
Univ Paris 06, Ctr Natl Rech Sci, Ecole Normale Super, Unite Mixte Rech 7625, F-75230 Paris 05, FranceChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Ben-Ari, Tamara
Neerinckx, Simon
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Univ Oslo, Dept Biol, Ctr Ecol & Evolutionary Synth, N-0316 Oslo, NorwayChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Neerinckx, Simon
Agier, Lydiane
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Univ Oslo, Dept Biol, Ctr Ecol & Evolutionary Synth, N-0316 Oslo, NorwayChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Agier, Lydiane
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Cazelles, Bernard
Xu, Lei
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Chinese Acad Sci, Inst Zool, State Key Lab Integrated Management Pest Insects, Beijing 100101, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Xu, Lei
Zhang, Zhibin
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Chinese Acad Sci, Inst Zool, State Key Lab Integrated Management Pest Insects, Beijing 100101, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Zhang, Zhibin
Fang, Xiye
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Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Fang, Xiye
Wang, Shuchun
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Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Wang, Shuchun
Liu, Qiyong
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Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Liu, Qiyong
Stenseth, Nils C.
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Univ Oslo, Dept Biol, Ctr Ecol & Evolutionary Synth, N-0316 Oslo, NorwayChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
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Univ Oslo, Dept Biol, Ctr Ecol & Evolutionary Synth, N-0316 Oslo, Norway
Univ Paris 06, Ctr Natl Rech Sci, Ecole Normale Super, Unite Mixte Rech 7625, F-75230 Paris 05, FranceChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Ben-Ari, Tamara
Neerinckx, Simon
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Univ Oslo, Dept Biol, Ctr Ecol & Evolutionary Synth, N-0316 Oslo, NorwayChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Neerinckx, Simon
Agier, Lydiane
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Univ Oslo, Dept Biol, Ctr Ecol & Evolutionary Synth, N-0316 Oslo, NorwayChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Agier, Lydiane
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Cazelles, Bernard
Xu, Lei
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Chinese Acad Sci, Inst Zool, State Key Lab Integrated Management Pest Insects, Beijing 100101, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Xu, Lei
Zhang, Zhibin
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Chinese Acad Sci, Inst Zool, State Key Lab Integrated Management Pest Insects, Beijing 100101, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Zhang, Zhibin
Fang, Xiye
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Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Fang, Xiye
Wang, Shuchun
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Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Wang, Shuchun
Liu, Qiyong
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Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R ChinaChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
Liu, Qiyong
Stenseth, Nils C.
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Univ Oslo, Dept Biol, Ctr Ecol & Evolutionary Synth, N-0316 Oslo, NorwayChinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China