Integrity of the P-site is probed during maturation of the 60S ribosomal subunit

被引:60
|
作者
Bussiere, Cyril [1 ]
Hashem, Yaser [2 ]
Arora, Sucheta [1 ]
Frank, Joachim [2 ,3 ]
Johnson, Arlen W. [1 ]
机构
[1] Univ Texas Austin, Inst Cellular & Mol Biol, Sect Mol Genet & Microbiol, Austin, TX 78712 USA
[2] Columbia Univ, Howard Hughes Med Inst, Dept Biochem & Mol Biophys, New York, NY 10032 USA
[3] Columbia Univ, Dept Biol Sci, New York, NY 10032 USA
基金
美国国家卫生研究院;
关键词
ELONGATION-FACTOR-G; SHWACHMAN-DIAMOND-SYNDROME; LARGE CONFORMATIONAL-CHANGES; GTP HYDROLYSIS; 70S RIBOSOME; TRANSFER-RNA; SYNDROME PROTEIN; SACCHAROMYCES-CEREVISIAE; CYTOPLASMIC MATURATION; STRUCTURE PREDICTION;
D O I
10.1083/jcb.201112131
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Eukaryotic ribosomes are preassembled in the nucleus and mature in the cytoplasm. Release of the antiassociation factor Tif6 by the translocase-like guanosine triphosphatase Efl1 is a critical late maturation step. In this paper, we show that a loop of Rpl10 that embraces the P-site transfer ribonucleic acid was required for release of Tif6, 90 angstrom away. Mutations in this P-site loop blocked 60S maturation but were suppressed by mutations in Tif6 or Efl1. Molecular dynamics simulations of the mutant Efl1 proteins suggest that they promote a conformation change in Efl1 equivalent to changes that elongation factor G and eEF2 undergo during translocation. These results identify molecular signaling from the P-site to Tif6 via Efl1, suggesting that the integrity of the P-site is interrogated during maturation. We propose that Efl1 promotes a functional check of the integrity of the 60S subunit before its first round of translation.
引用
收藏
页码:747 / 759
页数:13
相关论文
共 50 条
  • [31] Structural dynamics of the yeast Shwachman-Diamond syndrome protein (Sdo1) on the ribosome and its implication in the 60S subunit maturation
    Ma, Chengying
    Yan, Kaige
    Tan, Dan
    Li, Ningning
    Zhang, Yixiao
    Yuan, Yi
    Li, Zhifei
    Dong, Meng-Qiu
    Lei, Jianlin
    Gao, Ning
    PROTEIN & CELL, 2016, 7 (03) : 187 - 200
  • [32] Transition States of Uncatalyzed Hydrolysis and Aminolysis Reactions of a Ribosomal P-Site Substrate Determined by Kinetic Isotope Effects
    Hiller, David A.
    Zhong, Minghong
    Singh, Vipender
    Strobel, Scott A.
    BIOCHEMISTRY, 2010, 49 (18) : 3868 - 3878
  • [33] Yvh1 is required for a late maturation step in the 60S biogenesis pathway
    Kemmler, Stefan
    Occhipinti, Laura
    Veisu, Maria
    Panse, Vikram Govind
    JOURNAL OF CELL BIOLOGY, 2009, 186 (06) : 863 - 880
  • [34] RNF10 and RIOK3 facilitate 40S ribosomal subunit degradation upon 60S biogenesis disruption or amino acid starvation
    Ford, Pierce W.
    Garshott, Danielle M.
    Narasimhan, Mythreyi
    Ge, Xuezhen
    Jordahl, Eric M.
    Subramanya, Shubha
    Bennett, Eric J.
    CELL REPORTS, 2025, 44 (03):
  • [35] RPL29 codes for a non-essential protein of the 60S ribosomal subunit in Saccharomyces cerevisiae and exhibits synthetic lethality with mutations in genes for proteins required for subunit coupling
    DeLabre, ML
    Kessl, J
    Karamanou, S
    Trumpower, BL
    BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, 2002, 1574 (03): : 255 - 261
  • [36] Joining the interface: a site for Nmd3 association on 60S ribosome subunits
    Oeffinger, Marlene
    JOURNAL OF CELL BIOLOGY, 2010, 189 (07) : 1071 - 1073
  • [37] The final step of 40S ribosomal subunit maturation is controlled by a dual key lock
    Plassart, Laura
    Shayan, Ramtin
    Montellese, Christian
    Rinaldi, Dana
    Larburu, Natacha
    Pichereaux, Carole
    Froment, Carine
    Lebaron, Simon
    O'donohue, Marie-Francoise
    Kutay, Ulrike
    Marcoux, Julien
    Gleizes, Pierre-Emmanuel
    Plisson-Chastang, Celia
    ELIFE, 2021, 10
  • [38] Identification of a 57S translation complex containing closed-loop factors and the 60S ribosome subunit
    Denis, Clyde L.
    Laue, Thomas M.
    Wang, Xin
    SCIENTIFIC REPORTS, 2018, 8
  • [39] Discovery and Preliminary Characterization of Translational Modulators that Impair the Binding of eIF6 to 60S Ribosomal Subunits
    Pesce, Elisa
    Miluzio, Annarita
    Turcano, Lorenzo
    Minici, Claudia
    Cirino, Delia
    Calamita, Piera
    Manfrini, Nicola
    Oliveto, Stefania
    Ricciardi, Sara
    Grifantini, Renata
    Degano, Massimo
    Bresciani, Alberto
    Biffo, Stefano
    CELLS, 2020, 9 (01)
  • [40] Sequential domain assembly of ribosomal protein S3 drives 40S subunit maturation
    Mitterer, Valentin
    Murat, Guillaume
    Rety, Stephane
    Blaud, Magali
    Delbos, Lila
    Stanborough, Tamsyn
    Bergler, Helmut
    Leulliot, Nicolas
    Kressler, Dieter
    Pertschy, Brigitte
    NATURE COMMUNICATIONS, 2016, 7