Geodermatophilus saharensis sp nov., isolated from sand of the Saharan desert in Chad

被引:22
|
作者
Montero-Calasanz, M. C. [1 ,2 ]
Goeker, M. [1 ]
Poetter, G. [1 ]
Rohde, M. [3 ]
Sproeer, C. [1 ]
Schumann, P. [1 ]
Gorbushina, A. A. [4 ,5 ,6 ]
Klenk, H. -P. [1 ]
机构
[1] Leibniz Inst DSMZ German Collect Microorganisms &, D-38124 Braunschweig, Germany
[2] Ctr Las Torres Tomejil, IFAPA Inst Invest & Formac Agr & Pesquera, Seville 41200, Spain
[3] HZI Helmholtz Ctr Infect Res, D-38124 Braunschweig, Germany
[4] Fed Inst Mat Res & Testing, BAM, D-12205 Berlin, Germany
[5] Free Univ Berlin, Dept Biol Chem & Pharm, D-12249 Berlin, Germany
[6] Free Univ Berlin, Dept Earth Sci, D-12249 Berlin, Germany
关键词
Actinomycetes; Geodermatophilaceae; Taxonomy; Sahara desert; Phenotype microarray; DNA HYBRIDIZATION; BACTERIAL; ACTINOMYCETE; MENAQUINONES; GENUS;
D O I
10.1007/s00203-012-0860-8
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel Gram-positive, aerobic, actinobacterial strain, CF5/5, was isolated from soil in the Sahara desert, Chad. It grew best at 20-35 A degrees C and at pH 6.0-8.0 and with 0-4 % (w/v) NaCl, forming black-colored colonies. Chemotaxonomic and molecular characteristics of the isolate matched those described for members of the genus Geodermatophilus. The DNA G + C content was 75.9 mol%. The peptidoglycan contained meso-diaminopimelic acid; galactose and xylose were detected as diagnostic sugars. The main phospholipids were diphosphatidylglycerol, phosphatidylcholine, and phosphatidylinositol; MK-9(H-4) was the dominant menaquinone. The major cellular fatty acids were: iso-C-16:0 and iso-C-15:0. The 16S rRNA gene showed 95.6-98.3 % sequence similarity with the other named members of the genus Geodermatophilus. Based on the polyphasic taxonomy data, the isolate is proposed to represent a novel species, Geodermatophilus saharensis with the type strain CF5/5(T) = DSM 45423 = CCUG 62813 = MTCC 11416.
引用
收藏
页码:153 / 159
页数:7
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