Fostering Conservation via an Integrated Use of Conventional Approaches and High-Throughput SPET Genotyping: A Case Study Using the Endangered Canarian EndemicsSolanum lidiiandS. vespertilio(Solanaceae)

被引:11
作者
Gramazio, Pietro [1 ,2 ]
Jaen-Molina, Ruth [3 ]
Vilanova, Santiago [2 ]
Prohens, Jaime [2 ]
Marrero, Aguedo [3 ]
Caujape-Castells, Juli [3 ]
Anderson, Gregory J. [4 ]
机构
[1] Univ Tsukuba, Fac Life & Environm Sci, Tsukuba, Ibaraki, Japan
[2] Univ Politecn Valencia, Inst Conservac & Mejora Agrodiversidad Valenciana, Valencia, Spain
[3] CSIC, Jardin Bot Canario Viera & Clavijo, Unidad Asociada, Cabildo De Gran Canada, Las Palmas De G, Spain
[4] Univ Connecticut, Dept Ecol & Evolutionary Biol, Storrs, CT USA
基金
日本学术振兴会; 欧盟地平线“2020”;
关键词
conservation; endangered endemics; reproductive biology; SNPs; Solanaceae; Solanum; Canary Islands; SPET; VARIANT CALL FORMAT; MOLECULAR PHYLOGENETICS; GENETIC DIVERSITY; PALAEO-ISLANDS; NORTH FLANK; SNP DATA; EVOLUTION; TENERIFE; EGGPLANT; PACKAGE;
D O I
10.3389/fpls.2020.00757
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Islands provide unique opportunities to integrated research approaches to study evolution and conservation because boundaries are circumscribed, geological ages are often precise, and many taxa are greatly imperiled. We combined morphological and hybridization studies with high-throughput genotyping platforms to streamline relationships in the endangered monophyletic and highly diverse lineage ofSolanumin the Canarian archipelago, where three endemic taxa are currently recognized. Inter-taxa hybridizations were performed, and morphological expression was assessed with a common-garden approach. Using the eggplant Single Primer Enrichment Technology (SPET) platform with 5,093 probes, 74 individuals of three endemic taxa (Solanum lidii,S. vespertiliosubsp.vespertilio, andS. vespertiliosubsp.doramae) were sampled for SNPs. While morphological and breeding studies showed clear distinctions and some continuous variation, inter-taxon hybrids were fertile and heterotic for vigor traits. SPET genotyping revealed 1,421 high-quality SNPs and supported four, not three, distinct taxonomic entities associated with post-emergence geological, ecological and geographic factors of the islands. Given the lack of barriers to hybridization among all the taxa and their molecular differences, great care must be taken in population management. Conservation strategies must take account of the sexual and breeding systems and genotypic distribution among populations to successfully conserve and restore threatened/endangered island taxa, as exemplified bySolanumon the Canary Islands.
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页数:17
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