Perennial bioenergy crops have been shown to increase soil organic carbon (SOC) stocks, potentially offsetting anthropogenic C emissions. The effects of perennial bioenergy crops on SOC are typically assessed at shallow depths (<30 cm), but the deep root systems of these crops may also have substantial effects on SOC stocks at greater depths. We hypothesized that deep (>30 cm) SOC stocks would be greater under bioenergy crops relative to stocks under shallow-rooted conventional crop cover. To test this, we sampled soils to between 1- and 3-m depth at three sites in Oklahoma with 10- to 20-year-old switchgrass (Panicum virgatum) stands, and collected paired samples from nearby fields cultivated with shallow rooted annual crops. We measured root biomass, total organic C,C-14,C-13, and other soil properties in three replicate soil cores in each field and used a mixing model to estimate the proportion of recently fixed C under switchgrass based on(14)C. The subsoil C stock under switchgrass (defined over 500-1500 kg/m(2)equivalent soil mass, approximately 30-100 cm depth) exceeded the subsoil stock in neighboring fields by 1.5 kg C/m(2)at a sandy loam site, 0.6 kg C/m(2)at a site with loam soils, and showed no significant difference at a third site with clay soils. Using the mixing model, we estimated that additional SOC introduced after switchgrass cultivation comprised 31% of the subsoil C stock at the sandy loam site, 22% at the loam site, and 0% at the clay site. These results suggest that switchgrass can contribute significantly to subsoil organic C-but also indicated that this effect varies across sites. Our analysis shows that agricultural strategies that emphasize deep-rooted grass cultivars can increase soil C relative to conventional crops while expanding energy biomass production on marginal lands.