Intricate interplay between astrocytes and motor neurons in ALS

被引:108
作者
Phatnani, Hemali P. [1 ]
Guarnieri, Paolo [3 ]
Friedman, Brad A. [4 ]
Carrasco, Monica A. [1 ]
Muratet, Michael [5 ]
O'Keeffe, Sean [1 ]
Nwakeze, Chiamaka [1 ]
Pauli-Behn, Florencia [5 ]
Newberry, Kimberly M. [5 ]
Meadows, Sarah K. [5 ]
Tapia, Juan Carlos [2 ]
Myers, Richard M. [5 ]
Maniatis, Tom [1 ]
机构
[1] Columbia Univ, Med Ctr, Dept Biochem & Mol Biophys, New York, NY 10032 USA
[2] Columbia Univ, Med Ctr, Dept Neurosci, New York, NY 10032 USA
[3] Columbia Univ, Med Ctr, Herbert Irving Comprehens Canc Ctr, Columbia Initiat Syst Biol, New York, NY 10032 USA
[4] Harvard Univ, Dept Mol & Cellular Biol, Cambridge, MA 02138 USA
[5] HudsonAlpha Inst Biotechnol, Huntsville, AL 35806 USA
基金
美国国家卫生研究院;
关键词
motor neuron gene expression in ALS; reactive astrocyte gene expression in ALS; G93A mouse model of ALS; cell intrinsic and extrinsic effects on gene expression; AMYOTROPHIC-LATERAL-SCLEROSIS; APOLIPOPROTEIN-D; RNA-SEQ; DISEASE; GENE; DEGENERATION; EXPRESSION; MUTATIONS; TRANSCRIPTOME; PROTECTION;
D O I
10.1073/pnas.1222361110
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
ALS results from the selective and progressive degeneration of motor neurons. Although the underlying disease mechanisms remain unknown, glial cells have been implicated in ALS disease progression. Here, we examine the effects of glial cell/motor neuron interactions on gene expression using the hSOD1(G93A) (the G93A allele of the human superoxide dismutase gene) mouse model of ALS. We detect striking cell autonomous and nonautonomous changes in gene expression in cocultured motor neurons and glia, revealing that the two cell types profoundly affect each other. In addition, we found a remarkable concordance between the cell culture data and expression profiles of whole spinal cords and acutely isolated spinal cord cells during disease progression in the G93A mouse model, providing validation of the cell culture approach. Bioinformatics analyses identified changes in the expression of specific genes and signaling pathways that may contribute to motor neuron degeneration in ALS, among which are TGF-beta signaling pathways.
引用
收藏
页码:E756 / E765
页数:10
相关论文
共 52 条
  • [21] Transposase mediated construction of RNA-seq libraries
    Gertz, Jason
    Varley, Katherine E.
    Davis, Nicholas S.
    Baas, Bradley J.
    Goryshin, Igor Y.
    Vaidyanathan, Ramesh
    Kuersten, Scott
    Myers, Richard M.
    [J]. GENOME RESEARCH, 2012, 22 (01) : 134 - 141
  • [22] MOTOR-NEURON DEGENERATION IN MICE THAT EXPRESS A HUMAN CU,ZN SUPEROXIDE-DISMUTASE MUTATION
    GURNEY, ME
    PU, HF
    CHIU, AY
    DALCANTO, MC
    POLCHOW, CY
    ALEXANDER, DD
    CALIENDO, J
    HENTATI, A
    KWON, YW
    DENG, HX
    CHEN, WJ
    ZHAI, P
    SUFIT, RL
    SIDDIQUE, T
    [J]. SCIENCE, 1994, 264 (5166) : 1772 - 1775
  • [23] Astrocytes from familial and sporadic ALS patients are toxic to motor neurons
    Haidet-Phillips, Amanda M.
    Hester, Mark E.
    Miranda, Carlos J.
    Meyer, Kathrin
    Braun, Lyndsey
    Frakes, Ashley
    Song, SungWon
    Likhite, Shibi
    Murtha, Matthew J.
    Foust, Kevin D.
    Rao, Meghan
    Eagle, Amy
    Kammesheidt, Anja
    Christensen, Ashley
    Mendell, Jerry R.
    Burghes, Arthur H. M.
    Kaspar, Brian K.
    [J]. NATURE BIOTECHNOLOGY, 2011, 29 (09) : 824 - U79
  • [24] Inflammatory Mediators Alter the Astrocyte Transcriptome and Calcium Signaling Elicited by Multiple G-Protein-Coupled Receptors
    Hamby, Mary E.
    Coppola, Giovanni
    Ao, Yan
    Geschwind, Daniel H.
    Khakh, Baljit S.
    Sofroniew, Michael V.
    [J]. JOURNAL OF NEUROSCIENCE, 2012, 32 (42) : 14489 - 14510
  • [25] Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    Huang, Da Wei
    Sherman, Brad T.
    Lempicki, Richard A.
    [J]. NATURE PROTOCOLS, 2009, 4 (01) : 44 - 57
  • [26] Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
    Huang, Da Wei
    Sherman, Brad T.
    Lempicki, Richard A.
    [J]. NUCLEIC ACIDS RESEARCH, 2009, 37 (01) : 1 - 13
  • [27] A functional variant in ZNF512B is associated with susceptibility to amyotrophic lateral sclerosis in Japanese
    Iida, Aritoshi
    Takahashi, Atsushi
    Kubo, Michiaki
    Saito, Susumu
    Hosono, Naoya
    Ohnishi, Yozo
    Kiyotani, Kazuma
    Mushiroda, Taisei
    Nakajima, Masahiro
    Ozaki, Kouichi
    Tanaka, Toshihiro
    Tsunoda, Tatsuhiko
    Oshima, Shuichi
    Sano, Motoki
    Kamei, Tetsumasa
    Tokuda, Torao
    Aoki, Masashi
    Hasegawa, Kazuko
    Mizoguchi, Koichi
    Morita, Mitsuya
    Takahashi, Yuji
    Katsuno, Masahisa
    Atsuta, Naoki
    Watanabe, Hirohisa
    Tanaka, Fumiaki
    Kaji, Ryuji
    Nakano, Imaharu
    Kamatani, Naoyuki
    Tsuji, Shoji
    Sobue, Gen
    Nakamura, Yusuke
    Ikegawa, Shiro
    [J]. HUMAN MOLECULAR GENETICS, 2011, 20 (18) : 3684 - 3692
  • [28] Non-cell autonomous toxicity in neurodegenerative disorders: ALS and beyond
    Ilieva, Hristelina
    Polymenidou, Magdalini
    Cleveland, Don W.
    [J]. JOURNAL OF CELL BIOLOGY, 2009, 187 (06) : 761 - 772
  • [29] Culturing hippocampal neurons
    Kaech, Stefanie
    Banker, Gary
    [J]. NATURE PROTOCOLS, 2006, 1 (05) : 2406 - 2415
  • [30] Kanehisa M, 2002, NOVART FDN SYMP, V247, P91