Intricate interplay between astrocytes and motor neurons in ALS

被引:110
作者
Phatnani, Hemali P. [1 ]
Guarnieri, Paolo [3 ]
Friedman, Brad A. [4 ]
Carrasco, Monica A. [1 ]
Muratet, Michael [5 ]
O'Keeffe, Sean [1 ]
Nwakeze, Chiamaka [1 ]
Pauli-Behn, Florencia [5 ]
Newberry, Kimberly M. [5 ]
Meadows, Sarah K. [5 ]
Tapia, Juan Carlos [2 ]
Myers, Richard M. [5 ]
Maniatis, Tom [1 ]
机构
[1] Columbia Univ, Med Ctr, Dept Biochem & Mol Biophys, New York, NY 10032 USA
[2] Columbia Univ, Med Ctr, Dept Neurosci, New York, NY 10032 USA
[3] Columbia Univ, Med Ctr, Herbert Irving Comprehens Canc Ctr, Columbia Initiat Syst Biol, New York, NY 10032 USA
[4] Harvard Univ, Dept Mol & Cellular Biol, Cambridge, MA 02138 USA
[5] HudsonAlpha Inst Biotechnol, Huntsville, AL 35806 USA
基金
美国国家卫生研究院;
关键词
motor neuron gene expression in ALS; reactive astrocyte gene expression in ALS; G93A mouse model of ALS; cell intrinsic and extrinsic effects on gene expression; AMYOTROPHIC-LATERAL-SCLEROSIS; APOLIPOPROTEIN-D; RNA-SEQ; DISEASE; GENE; DEGENERATION; EXPRESSION; MUTATIONS; TRANSCRIPTOME; PROTECTION;
D O I
10.1073/pnas.1222361110
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
ALS results from the selective and progressive degeneration of motor neurons. Although the underlying disease mechanisms remain unknown, glial cells have been implicated in ALS disease progression. Here, we examine the effects of glial cell/motor neuron interactions on gene expression using the hSOD1(G93A) (the G93A allele of the human superoxide dismutase gene) mouse model of ALS. We detect striking cell autonomous and nonautonomous changes in gene expression in cocultured motor neurons and glia, revealing that the two cell types profoundly affect each other. In addition, we found a remarkable concordance between the cell culture data and expression profiles of whole spinal cords and acutely isolated spinal cord cells during disease progression in the G93A mouse model, providing validation of the cell culture approach. Bioinformatics analyses identified changes in the expression of specific genes and signaling pathways that may contribute to motor neuron degeneration in ALS, among which are TGF-beta signaling pathways.
引用
收藏
页码:E756 / E765
页数:10
相关论文
共 52 条
[21]   Transposase mediated construction of RNA-seq libraries [J].
Gertz, Jason ;
Varley, Katherine E. ;
Davis, Nicholas S. ;
Baas, Bradley J. ;
Goryshin, Igor Y. ;
Vaidyanathan, Ramesh ;
Kuersten, Scott ;
Myers, Richard M. .
GENOME RESEARCH, 2012, 22 (01) :134-141
[22]   MOTOR-NEURON DEGENERATION IN MICE THAT EXPRESS A HUMAN CU,ZN SUPEROXIDE-DISMUTASE MUTATION [J].
GURNEY, ME ;
PU, HF ;
CHIU, AY ;
DALCANTO, MC ;
POLCHOW, CY ;
ALEXANDER, DD ;
CALIENDO, J ;
HENTATI, A ;
KWON, YW ;
DENG, HX ;
CHEN, WJ ;
ZHAI, P ;
SUFIT, RL ;
SIDDIQUE, T .
SCIENCE, 1994, 264 (5166) :1772-1775
[23]   Astrocytes from familial and sporadic ALS patients are toxic to motor neurons [J].
Haidet-Phillips, Amanda M. ;
Hester, Mark E. ;
Miranda, Carlos J. ;
Meyer, Kathrin ;
Braun, Lyndsey ;
Frakes, Ashley ;
Song, SungWon ;
Likhite, Shibi ;
Murtha, Matthew J. ;
Foust, Kevin D. ;
Rao, Meghan ;
Eagle, Amy ;
Kammesheidt, Anja ;
Christensen, Ashley ;
Mendell, Jerry R. ;
Burghes, Arthur H. M. ;
Kaspar, Brian K. .
NATURE BIOTECHNOLOGY, 2011, 29 (09) :824-U79
[24]   Inflammatory Mediators Alter the Astrocyte Transcriptome and Calcium Signaling Elicited by Multiple G-Protein-Coupled Receptors [J].
Hamby, Mary E. ;
Coppola, Giovanni ;
Ao, Yan ;
Geschwind, Daniel H. ;
Khakh, Baljit S. ;
Sofroniew, Michael V. .
JOURNAL OF NEUROSCIENCE, 2012, 32 (42) :14489-14510
[25]   Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources [J].
Huang, Da Wei ;
Sherman, Brad T. ;
Lempicki, Richard A. .
NATURE PROTOCOLS, 2009, 4 (01) :44-57
[26]   Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [J].
Huang, Da Wei ;
Sherman, Brad T. ;
Lempicki, Richard A. .
NUCLEIC ACIDS RESEARCH, 2009, 37 (01) :1-13
[27]   A functional variant in ZNF512B is associated with susceptibility to amyotrophic lateral sclerosis in Japanese [J].
Iida, Aritoshi ;
Takahashi, Atsushi ;
Kubo, Michiaki ;
Saito, Susumu ;
Hosono, Naoya ;
Ohnishi, Yozo ;
Kiyotani, Kazuma ;
Mushiroda, Taisei ;
Nakajima, Masahiro ;
Ozaki, Kouichi ;
Tanaka, Toshihiro ;
Tsunoda, Tatsuhiko ;
Oshima, Shuichi ;
Sano, Motoki ;
Kamei, Tetsumasa ;
Tokuda, Torao ;
Aoki, Masashi ;
Hasegawa, Kazuko ;
Mizoguchi, Koichi ;
Morita, Mitsuya ;
Takahashi, Yuji ;
Katsuno, Masahisa ;
Atsuta, Naoki ;
Watanabe, Hirohisa ;
Tanaka, Fumiaki ;
Kaji, Ryuji ;
Nakano, Imaharu ;
Kamatani, Naoyuki ;
Tsuji, Shoji ;
Sobue, Gen ;
Nakamura, Yusuke ;
Ikegawa, Shiro .
HUMAN MOLECULAR GENETICS, 2011, 20 (18) :3684-3692
[28]   Non-cell autonomous toxicity in neurodegenerative disorders: ALS and beyond [J].
Ilieva, Hristelina ;
Polymenidou, Magdalini ;
Cleveland, Don W. .
JOURNAL OF CELL BIOLOGY, 2009, 187 (06) :761-772
[29]   Culturing hippocampal neurons [J].
Kaech, Stefanie ;
Banker, Gary .
NATURE PROTOCOLS, 2006, 1 (05) :2406-2415
[30]  
Kanehisa M, 2002, NOVART FDN SYMP, V247, P91