Observing How Glutathione and S-Hexyl Glutathione Bind to Glutathione S-Transferase from Rhipicephalus (Boophilus) microplus

被引:5
作者
Rangubpit, Warin [1 ,2 ,3 ]
Suwan, Eukote [1 ,2 ]
Sangthong, Danai [1 ,2 ]
Wongpanit, Kannika [4 ]
Stich, Roger W. [5 ]
Pongprayoon, Prapasiri [3 ,6 ]
Jittapalapong, Sathaporn [1 ,2 ]
机构
[1] Kasetsart Univ, Kasetsart Vaccines & Biol Innovat Ctr, Bangkok 10900, Thailand
[2] Kasetsart Univ, Fac Vet Technol, Dept Vet Technol, Bangkok 10900, Thailand
[3] Kasetsart Univ, Dept Chem, Fac Sci, Bangkok 10900, Thailand
[4] Kasetsart Univ, Fac Nat Resources & Agro Ind, Dept Agr & Resources, Chalermphrakiat Sakon Nakhon Prov Campus, Sakon Nakhon 47000, Thailand
[5] Univ Missouri, Dept Vet Pathobiol, Columbia, MO 65211 USA
[6] Kasetsart Univ, Inst Adv Studies, Ctr Adv Studies Nanotechnol Chem Food & Agr Ind, Bangkok 10900, Thailand
关键词
glutathione s-transferase; glutathione; s-hexyl glutathione; MD simulation; R; microplus; MU-CLASS; ACARICIDE RESISTANCE; MOLECULAR-CLONING; MECHANISM; POPULATIONS; DYNAMICS; STATE; FIELD; SITE; TICK;
D O I
10.3390/ijms232112775
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Rhipicephalus (Boophilus) microplus is one of the most widespread ticks causing a massive loss to livestock production. The long-term use of acaracides rapidly develops acaracide resistance. In R. microplus, enhancing the metabolic activity of glutathione S-transferase (RmGST) is one of the mechanisms underlying acaracide resistance. RmGST catalyzes the conjugation of glutathione (GSH) to insecticides causing an easy-to-excrete conjugate. The active RmGST dimer contains two active sites (hydrophobic co-substrate binding site (H-site) and GSH binding site (G-site)) in each monomer. To preserve the insecticide efficacy, s-hexyl glutathione (GTX), a GST inhibitor, has been used as a synergist. To date, no molecular information on the RmGST-GSH/GTX complex is available. The insight is important for developing a novel RmGST inhibitor. Therefore, in this work, molecular dynamics simulations (MD) were performed to explore the binding of GTX and GSH to RmGST. GSH binds tighter and sits rigidly inside the G-site, while flexible GTX occupies both active sites. In GSH, the backbone mainly interacts with W8, R43, W46, K50, N59, L60, Q72, and S73, while its thiol group directs to Y7. In contrast, the aliphatic hexyl of GTX protrudes into the H-site and allows a flexible peptide core to form various interactions. Such high GTX flexibility and the protrusion of its hexyl moiety to the H-site suggest the dual role of GTX in preventing the conjugation reaction and the binding of acaracide. This insight can provide a better understanding of an important insecticide-resistance mechanism, which may in turn facilitate the development of novel approaches to tick control.
引用
收藏
页数:14
相关论文
共 53 条
[1]   Glutathione transferases: substrates, inihibitors and pro-drugs in cancer and neurodegenerative diseases [J].
Allocati, Nerino ;
Masulli, Michele ;
Di Ilio, Carmine ;
Federici, Luca .
ONCOGENESIS, 2018, 7
[2]   GLUTATHIONE S-TRANSFERASES - REACTION-MECHANISM, STRUCTURE, AND FUNCTION [J].
ARMSTRONG, RN .
CHEMICAL RESEARCH IN TOXICOLOGY, 1991, 4 (02) :131-140
[3]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690
[4]   Characterization of the electrophile binding site and substrate binding mode of the 26-kDa glutathione S-transferase from Schistosoma japonicum [J].
Cardoso, RMF ;
Daniels, DS ;
Bruns, CM ;
Tainer, JA .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2003, 51 (01) :137-146
[5]   Accumulation of acaricide resistance mechanisms in Rhipicephalus (Boophilus) microplus (Acari: Ixodidae) populations from New Caledonia Island [J].
Chevillon, Christine ;
Ducornez, Sophie ;
de Meeus, Thierry ;
Koffi, Brou Basile ;
Gaia, Huguette ;
Delathiere, Jean-Michel ;
Barre, Nicolas .
VETERINARY PARASITOLOGY, 2007, 147 (3-4) :276-288
[6]   VERIFICATION OF PROTEIN STRUCTURES - PATTERNS OF NONBONDED ATOMIC INTERACTIONS [J].
COLOVOS, C ;
YEATES, TO .
PROTEIN SCIENCE, 1993, 2 (09) :1511-1519
[7]   Role of invariant tyrosines in a crustacean mu-class glutathione S-transferase from shrimp Litopenaeus vannamei:: Site-directed mutagenesis of Y7 and Y116 [J].
Contreras-Vergara, Carmen A. ;
Valenzuela-Soto, Elisa M. ;
Arvizu-Flores, Aldo A. ;
Sotelo-Mundo, Rogerio R. ;
Yepiz-Plascencia, Gloria .
BIOCHIMIE, 2008, 90 (06) :968-971
[8]   ACPYPE - AnteChamber PYthon Parser interfacE [J].
Alan W Sousa da Silva ;
Wim F Vranken .
BMC Research Notes, 5 (1)
[9]   PARTICLE MESH EWALD - AN N.LOG(N) METHOD FOR EWALD SUMS IN LARGE SYSTEMS [J].
DARDEN, T ;
YORK, D ;
PEDERSEN, L .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (12) :10089-10092
[10]   Glutathione catalysis and the reaction mechanisms of glutathione-dependent enzymes [J].
Deponte, Marcel .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 2013, 1830 (05) :3217-3266